Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0055 ATGGTGAAGAAGGCGGTCCCCGACTGGCTCAACAGTTCTCTCTGGTCCTCCGCTCCTTCCTCTGACGACCACCGTGATCTCCGCCACTCCACTACCACATCCACTAACACCTATGCCAATGAAGATCGAGAGCACTCCGCTGTGGACCCACCTTTACCTTCACCTTCTCCTCCTTCACCACCGATCAGAGAAGATCCTCCACAGCCCCAGATAATCGAAGAATCAAGAACCAATCATGTTGCAAACGATCGCAATGGCACTTCCTCTGCTCCTTCAACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGCTATCCAGAAAGGTGATAGATATTAGGGAGCTGCGGAGAATTGCATGCCAAGGTATACCTGATGGTGCTGGGATACGTTCTACCGTATGGAAGCTTTTGCTTGGATATCTTCCACCGGATCGAGGTCTTTGGTCATCTGAATTGGCTAAGAAGAGGTCTCAATATAAGCATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTTCAAGTGACACTTCTGATGCAAAATGTGGGAATCGAGGCTTGCTCTCTAGATCTGAAGTCACTCACGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACAGAGATAATAGATCAAATTGATCGAGATGTAAAGCGCACTCATCCAGATATTAATTTTTTTTCTGGTGACTCGCAGTTTGCAAAATCAAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCGGGTGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATACAGCCTTCGTTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTAAGCGGGTTCCGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATTCGTTCCACTATTGCTCGATTATCACAGCTTTTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATTACAACCAAAGTCAATCCCCAATTCTATGCGTTTAGGTGGATTACACTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACTCTTCTGAGTGATCCAGAAGGACCACAGGAGACTCTGTTACGGATATGCTGTGCAATGCTAATTCTCGTTCGGAGGCGCCTTCTAGCTGGTGATTTCACGTCCAATCTCAAGTTGCTACAAAATTACCCGTCTACAAACACAAGTCATTTGCTCTATGTTGCCAATAAGTTGCGGATTCAAGGAGTCTGA 1350 0.4422 MVKKAVPDWLNSSLWSSAPSSDDHRDLRHSTTTSTNTYANEDREHSAVDPPLPSPSPPSPPIREDPPQPQIIEESRTNHVANDRNGTSSAPSTDDISRQAQLLAELSRKVIDIRELRRIACQGIPDGAGIRSTVWKLLLGYLPPDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMYSSSSDTSDAKCGNRGLLSRSEVTHGEHPLSLGKTSIWNQFFQDTEIIDQIDRDVKRTHPDINFFSGDSQFAKSNQEALKNILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDSDEENTAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPSTNTSHLLYVANKLRIQGV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0055 449 Gene3D - 328 447 - -
Lele24g0055 449 SMART tbc_4 120 418 IPR000195 -
Lele24g0055 449 MobiDBLite consensus disorder prediction 1 96 - -
Lele24g0055 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 104 351 IPR035969 -
Lele24g0055 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 94 427 - -
Lele24g0055 449 MobiDBLite consensus disorder prediction 71 96 - -
Lele24g0055 449 MobiDBLite consensus disorder prediction 50 67 - -
Lele24g0055 449 FunFam TBC1 domain family member 13 209 320 - -
Lele24g0055 449 Pfam Rab-GTPase-TBC domain 222 413 IPR000195 -
Lele24g0055 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 211 320 - -
Lele24g0055 449 FunFam TBC1 domain family member 13 327 448 - -
Lele24g0055 449 FunFam TBC1 domain family member 97 151 - -
Lele24g0055 449 Gene3D - 95 148 - -
Lele24g0055 449 ProSiteProfiles TBC/rab GAP domain profile. 125 392 IPR000195 -
Lele24g0055 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 329 446 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0055 Lele-ChrLele24 374962 379278 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0060 21 403406 407764 Lele24g0055 24 374962 379278 hybridization
Lele22g0059 22 351113 355363 Lele24g0055 24 374962 379278 hybridization