Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0059 ATGGTGAAGAAGCGAGTCCCCGACTGGCTCAACAGTTCTCTCTGGTCCTCCGCTCCTTCCTCTGACGACCACCGTGATCTCCGCCACTCCACTACCACATCCACCAACACCTATGCCAATGAAGAGCGAGAGCGCTCCGCTGTGGACCCACCTTTACCTGCACCTTCTCCTCCTTCACAACCTATCAGAGAAGATCCTCCACAGCCCCAGATAATCGAAGAATCAAGTACCAATCATGTTGCAAACGATTGCAATGGCACTTCCTCTGCTCCTTTAACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGGTGATAGATATTAGGGAGCTGCGGAGAATTGCATGCCAAGGTATACCTGATGGTGCTGGGATACGTTCTACCGTATGGAAGCTTTTGCTTGGATATCTTCCACCGGATCGAGGTCTTTGGTCATCTGAATTGGCTAAGAAGAGGTCTCAATATAAGCATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTTCAAGTGACACTTTTGATGCAAAATGTGGGAACCGAGGCTTGCTCTCTAGATCTGAAGTCGCTCACGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACAGAGATAATAGATCAAATTGATCGAGATGTAAAGCGCACTCATCCAGATATGAATTTTTTTTCTGGTGACGCGCAGTTTGCAAAATCAAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCGGGTGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATACAGCCTTTGTTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTAAGTGGGTTCCGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATTCGTTCCACTATTGCTCGATTATCACAGCTTTTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATTACAACCAAAGTCAATCCTCAATTCTATGCGTTTAGGTGGATTACACTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACTCTTCTGAGTGATCCAGAAGGACCACAGGAGACTCTCTTACGGATATGCTGTGCAATGCTAATTCTCGTTCGGAGACGCCTTATAGCTGGTGATTTCACGTCCAATCTCAAGTTGCTGCAAAATTACCCGTCTACAAACATAAGTCATTTGCTCTATGTTGCCAATAAGTTGCGGGTTCAAGGAGTCTGA 1338 0.441 MVKKRVPDWLNSSLWSSAPSSDDHRDLRHSTTTSTNTYANEERERSAVDPPLPAPSPPSQPIREDPPQPQIIEESSTNHVANDCNGTSSAPLTDDISRQAQLLAEVIDIRELRRIACQGIPDGAGIRSTVWKLLLGYLPPDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMYSSSSDTFDAKCGNRGLLSRSEVAHGEHPLSLGKTSIWNQFFQDTEIIDQIDRDVKRTHPDMNFFSGDAQFAKSNQEALKNILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDSDEENTAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLILVRRRLIAGDFTSNLKLLQNYPSTNISHLLYVANKLRVQGV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0059 445 Pfam Rab-GTPase-TBC domain 218 408 IPR000195 -
Lele22g0059 445 MobiDBLite consensus disorder prediction 50 65 - -
Lele22g0059 445 FunFam TBC1 domain family member 13 205 316 - -
Lele22g0059 445 Gene3D - 324 444 - -
Lele22g0059 445 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 93 423 - -
Lele22g0059 445 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 106 347 IPR035969 -
Lele22g0059 445 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 325 442 IPR035969 -
Lele22g0059 445 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 207 316 - -
Lele22g0059 445 MobiDBLite consensus disorder prediction 1 70 - -
Lele22g0059 445 FunFam TBC1 domain family member 13 323 444 - -
Lele22g0059 445 Gene3D - 99 144 - -
Lele22g0059 445 ProSiteProfiles TBC/rab GAP domain profile. 121 388 IPR000195 -
Lele22g0059 445 SMART tbc_4 116 414 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0059 Lele-ChrLele22 351113 355363 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0059 22 351113 355363 Lele23g1991 23 22772530 22776865 hybridization
Lele22g0059 22 351113 355363 Lele24g0055 24 374962 379278 hybridization