Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0060 ATGGTCAAGAAGCGGGTCCCCGACTGGCTTAACAGTTCTCTCTGGTCCTCCGCTCCTTCCTCTGACGACCACCGTGATCTCCGCCTCTCCGCCACCACATCCACCAACATCTATGCCAATGAAGAGCGAGAGTGCTCCGCTCTGGACACACCTTTACCTGCACCTTCTCCTCCTTCACCAACTATCAGAGAAGATCATCCACAGCCCCAGATAATCGAAGATTCAAGAACCAATCATGTTGCTAACGATCACAATGGCACTTCCTCTACTCCTTCAACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGCTATCGAGAAAAGTGATAGATATGAGGGAGCTGCGGAGAATTGCATGTCAAGGTATACCCGATGGTGCCGGGATACGTTCTACTGTATGGAAGCTTTTGCTTGGATATCTTCCCCTGGATCGAGGTCTTTGGTCATCTGAATTGTGTAAGAAGAGGTCTCAATATAAGCATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAAGATGTACAGCTCTACAAGTGACACTTCTGATGCAAAATGTGGGAGTCGAGGCTTGCTCTCTAGATCTGAAGTCACTCACGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACAGAGATAATAGATCAAATTGATCGAGATGTAAAGCGCACTCATCCAGATATGAATTTTTTTTCTGGTGACTCGCAGTTTGCAAAATCCAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCAGGTGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATACAGCCTTTGTGGAAGCAGACACATTCTTTTGTTTTGTCGAGCTATTAAGTGGGTTTCGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATTCGTTCCACTATTGCTCGATTATCACAGCTTTTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATTACGACTAAAGTCAATCCCCAATTCTATGCGTTTAGGTGGATTACACTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACCCTTCTAAGTGATCCAGAAGGTCCACAGGAGACTCTGTTACGGATATGCTGTGCAATGCTAATTCTCGTTCGGAGGCGCCTTCTAGCGGGTGATTTCACGTCCAATCTCAAGTTGCTGCAAAATTACCCGTCTGCAAACATAAGCCATTTGCTCTATGTCGCCAATAAGTTGCGGGTTCAAGGAGTCTGA 1350 0.443 MVKKRVPDWLNSSLWSSAPSSDDHRDLRLSATTSTNIYANEERECSALDTPLPAPSPPSPTIREDHPQPQIIEDSRTNHVANDHNGTSSTPSTDDISRQAQLLAELSRKVIDMRELRRIACQGIPDGAGIRSTVWKLLLGYLPLDRGLWSSELCKKRSQYKHFKEEILMNPSEITRKMYSSTSDTSDAKCGSRGLLSRSEVTHGEHPLSLGKTSIWNQFFQDTEIIDQIDRDVKRTHPDMNFFSGDSQFAKSNQEALKNILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDSDEENTAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPSANISHLLYVANKLRVQGV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0060 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 211 320 - -
Lele21g0060 449 MobiDBLite consensus disorder prediction 1 96 - -
Lele21g0060 449 Pfam Rab-GTPase-TBC domain 222 413 IPR000195 -
Lele21g0060 449 FunFam TBC1 domain family member 13 209 320 - -
Lele21g0060 449 ProSiteProfiles TBC/rab GAP domain profile. 125 392 IPR000195 -
Lele21g0060 449 FunFam TBC1 domain family member 13 327 448 - -
Lele21g0060 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 93 427 - -
Lele21g0060 449 Gene3D - 328 448 - -
Lele21g0060 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 329 446 IPR035969 -
Lele21g0060 449 FunFam TBC1 domain family member 97 151 - -
Lele21g0060 449 Gene3D - 95 148 - -
Lele21g0060 449 MobiDBLite consensus disorder prediction 81 96 - -
Lele21g0060 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 104 351 IPR035969 -
Lele21g0060 449 SMART tbc_4 120 418 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0060 Lele-ChrLele21 403406 407764 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0060 21 403406 407764 Lele23g1991 23 22772530 22776865 hybridization
Lele21g0060 21 403406 407764 Lele24g0055 24 374962 379278 hybridization