Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0047 ATGGCAGCTCCAGCGGCGGCCCCCCTTCTTCTGGTCTCCATCGCCGCCGCTCTCTGCATGGACGTCCAAGGCCAAGTCGTGGGAGTCGGAGGAGGCAGCTGGTGTGTTGCCAGAAGCGACGCCAGTAACATGGCTCTCCAAACGGCGTTGGATTACGCATGCGGCTCTGAAGCCGACTGCCATCCCATTCAGCCCGACGGCCTCTGTTTCCTGCCAAACACCATCCAAGCTCACGCCTCCTACGCCTTCAACAGCTACTATCAGCGCAAGACCCGTGCCCCTGGCTCTTGCGACTTCGCCGGCACCGCCACCATTGCTCAGACTGACCCCAGCTATGGATCTTGTGTGTACCCGACTTCTTCCAGCACCGCTGGAGGGACGAGTACACCGATCACAACACCGCCGTTGATCAACCCAAACGTGCCAACTCCGACCACAACATCACCCTTCTACGGTGGGGTTGGCGGTGCCGGCGGAATGAATCCAGGGATGACCTCTCCTATGCCTGACAATTCTAGAGCAACCTTGTCAACGGCAACCGCCAGTGTAGTTTTATTTTTTCCATCCTTTTCTGTTCTTTACCTTGTGATGAGAGCGTAG 600 0.5767 MAAPAAAPLLLVSIAAALCMDVQGQVVGVGGGSWCVARSDASNMALQTALDYACGSEADCHPIQPDGLCFLPNTIQAHASYAFNSYYQRKTRAPGSCDFAGTATIAQTDPSYGSCVYPTSSSTAGGTSTPITTPPLINPNVPTPTTTSPFYGGVGGAGGMNPGMTSPMPDNSRATLSTATASVVLFFPSFSVLYLVMRA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0047 199 Pfam X8 domain 34 104 IPR012946 -
Lele24g0047 199 SMART X8_cls 33 117 IPR012946 -
Lele24g0047 199 PANTHER BETA-1,3 GLUCANASE 29 125 IPR044788 -
Lele24g0047 199 Gene3D - 30 125 - -
Lele24g0047 199 FunFam Glucan endo-1,3-beta-glucosidase 4 29 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0047 Lele-ChrLele24 341603 342944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0047 29 119 Glycoside Hydrolase AT2G05790 55.435 2.13e-29 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0053 21 369860 371060 Lele24g0047 24 341603 342944 hybridization
Lele22g0051 22 315873 317282 Lele24g0047 24 341603 342944 hybridization