Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0053 ATGGCAGTTTCAGCGGCGGCCCTCCTTCTTCTGGTCCCCATCGCCGCCGCGCTCTGCATGGTCGTCCAAGGCCAAGTTGTGGGAGTCGGAGGAGGCAGCTGGTGTGTTGCCAGAAGCGACGCCAGTAACAGGGCCCTCCAGACGGCGTTGGACTACGCATGCGGCGCCGGAGCCGACTGCCATCCCATTCAGCCCGACGGCCTCTGTTTCCTGCCAAACACCATCCAAGCTCACGCCTCCTACGCCTTCAACAGCTACTATCAGCGCAAGACCCGTGCCCCTGGCTCTTGCGAGTTCGCCGGCACCGCTACCATTGCTCAGACTGACCCCAGCTATGGATCTTGTGTGTACCCGACTTCTTCCAGCACTGCTGGAGGGACGAATATACCGATCACAACACCGCCGTTGATCGACCCAAATGTGCCAACTCCGATCACAACATCACCCTTCTACGGCAGCGCGGGCGGAATCAATCCAGGGATGACCTCTCCTATGCCTGACAATTCCAGAGCAACCTTGTCCACGGCCACCGCCAGTTTAGTTTTATTTTTTCCCTCTTATCCTGTTCTTTACCTTTTGATGATAGCGTAG 591 0.577 MAVSAAALLLLVPIAAALCMVVQGQVVGVGGGSWCVARSDASNRALQTALDYACGAGADCHPIQPDGLCFLPNTIQAHASYAFNSYYQRKTRAPGSCEFAGTATIAQTDPSYGSCVYPTSSSTAGGTNIPITTPPLIDPNVPTPITTSPFYGSAGGINPGMTSPMPDNSRATLSTATASLVLFFPSYPVLYLLMIA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0053 196 FunFam Glucan endo-1,3-beta-glucosidase 4 29 121 - -
Lele21g0053 196 PANTHER BETA-1,3 GLUCANASE 22 125 IPR044788 -
Lele21g0053 196 Pfam X8 domain 34 104 IPR012946 -
Lele21g0053 196 Gene3D - 30 125 - -
Lele21g0053 196 SMART X8_cls 33 117 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0053 Lele-ChrLele21 369860 371060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0053 29 119 Glycoside Hydrolase AT2G05790 56.522 4.64e-31 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0053 21 369860 371060 Lele23g2002 23 22808969 22810164 hybridization
Lele21g0053 21 369860 371060 Lele24g0047 24 341603 342944 hybridization