Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0051 ATGTCAGCTCCAATGGCGGCCCTCCTTCTTCTGGTCTCCATCGCCGCCGCTCTCTGCATGGCCGTCCAAGGCCAAGTCGTGGGAGTAGGAGGAGGCAGCTGGTGTGTTGCCAGAAGCGACGCCAGTAACATGGCTCTCCAAACGGCTTTGGACTACGCATGTGGCTCCGGAGCCGACTGCCATCCCATTCAGCCCGACGGCCTCTGTTTCCTGCCAAACACCATCCAAGCTCACGCCTCCTACGCCTTCAACAGCTACTATCAGCTCAAGACCCGTGCCCCTGGCTCTTGCGACTTCGCCGGCACTGCCACCATTGCTCAGACTGACCCCAGCTATGGATCTTGTGTGTACCCGACTTCTTCCAGCACGCCTGGAGGGACGAGTATACCGATCACAACACCGCCGTTGATCAACCCAAACGTGCCAACTCCGACCACAACATCACCCTTCTATGGTGGGGTTGGCGGTGACGGCGGAATGAATCCAGGGATGACCTCTCCCATGCCTGACAATTCTAGAGCAACCTTGTCAACGGCCACCGCCAGTTTAGCTTTATTTTTTCCCTCTTTTCCTGTTCTTTACCTTGTGATGATAGCGTAG 600 0.5667 MSAPMAALLLLVSIAAALCMAVQGQVVGVGGGSWCVARSDASNMALQTALDYACGSGADCHPIQPDGLCFLPNTIQAHASYAFNSYYQLKTRAPGSCDFAGTATIAQTDPSYGSCVYPTSSSTPGGTSIPITTPPLINPNVPTPTTTSPFYGGVGGDGGMNPGMTSPMPDNSRATLSTATASLALFFPSFPVLYLVMIA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0051 199 PANTHER BETA-1,3 GLUCANASE 18 130 IPR044788 -
Lele22g0051 199 FunFam Glucan endo-1,3-beta-glucosidase 4 29 121 - -
Lele22g0051 199 SMART X8_cls 33 117 IPR012946 -
Lele22g0051 199 Pfam X8 domain 34 104 IPR012946 -
Lele22g0051 199 Gene3D - 30 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0051 Lele-ChrLele22 315873 317282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0051 29 119 Glycoside Hydrolase AT2G05790 56.522 4.85e-30 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0051 22 315873 317282 Lele23g2002 23 22808969 22810164 hybridization
Lele22g0051 22 315873 317282 Lele24g0047 24 341603 342944 hybridization