Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g2002 ATGGCAGTTCCAGCGGCGGCCCTCCTTCTTCTGGTCTCCATAGCCGCCGCGCTCTGCATGGCCGTCCAAGGCCAAGTTGTGGGAGTCGGAGGAGGCAGCTGGTGTGTTGCCAGAAGCGACGCCACTAACATGGCCCTCCAGACGGCGTTGGACTACGCATGCGGCGCCGGAGCCGACTGCCATCCCATTCAGCCCGACGGCCTCTGTTTCCTGCCAAACACCATCCAAGCTCACGCCTCCTACGCCTTCAACAGCTACTATCAGCGCAAGACCCGTGCCCCTGGCTCTTGCGAGTTCGCCGGCACCGCTACCATTGCTCAGACTGACCCCAGCTATGGATCTTGTGTGTACCCGACTTCTTCCAGCACTGCTGGAGGGATGAATATACCGACCACAACACCGCCGTTGATCAACCCAAATGTGCCAACTCCGATCACAACATCCCCCTTCTACGGCAGCGCGGGCGGAATCAATCCAGGGATGACCTCTCCTATGCCTGACAATTCCAGAGCAACCATGTCAACGGCCACCGCCAGTTTAGTTTTATTTTTTCCCTCTTTTCCTGTTCTTTGCCTTTTGATGATAGCATAG 591 0.5736 MAVPAAALLLLVSIAAALCMAVQGQVVGVGGGSWCVARSDATNMALQTALDYACGAGADCHPIQPDGLCFLPNTIQAHASYAFNSYYQRKTRAPGSCEFAGTATIAQTDPSYGSCVYPTSSSTAGGMNIPTTTPPLINPNVPTPITTSPFYGSAGGINPGMTSPMPDNSRATMSTATASLVLFFPSFPVLCLLMIA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g2002 196 FunFam Glucan endo-1,3-beta-glucosidase 4 29 121 - -
Lele23g2002 196 SMART X8_cls 33 117 IPR012946 -
Lele23g2002 196 PANTHER BETA-1,3 GLUCANASE 18 127 IPR044788 -
Lele23g2002 196 Pfam X8 domain 34 104 IPR012946 -
Lele23g2002 196 Gene3D - 30 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g2002 Lele-ChrLele23 22808969 22810164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g2002 29 119 Glycoside Hydrolase AT2G05790 56.522 9.14e-31 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0053 21 369860 371060 Lele23g2002 23 22808969 22810164 hybridization
Lele22g0051 22 315873 317282 Lele23g2002 23 22808969 22810164 hybridization