Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1938 ATGGGAACAAGTGATATAGGACCTGCCCCAGGATTTGGTTATCGGAATACATCAAGCCAAAAGATTTCGTTAGCGTTTGGAGGAAGCGAGTCCATGGGTCTTAAATTTGGACTTCCTTGCACACGCTCTTTTAAAAGCAGTCTGAGGAAGAATGGCTTTCCCTTGCAGGTAGTTTGCATTGACTATCCAAGGCCAGAGCTTGAAAACACAGTTAATTTCTTAGAAGCTGCTTACTTGTCTTCAACCTTTCGCGCTTCATCACGTCCAACAAAACCATTAGAGGTTGTTATTGCGGGTGCAGGGTTAGCTGGTTTGTCGACTGCGAAATATTTGGCAGATGCTGGTCATAAGCCTATACTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCCTGGAAAGATGAAGATGGAGACTGGTATGAGACTGGCTTACACATATTCTTTGGAGCATACCCCAATGTTCAGAACCTATTTGGAGAACTGGGTATTAATGATCGGTTACAGTGGAAGGAGCATTCTATGATTTTTGCTATGCCAAACAAGCCTGGACAGTTCAGTCGATTTGATTTTCCTGAAGTCCTCCCGGCTCCTTTGAATGGAATATGGGCAATATTGAGGAACAGTGAGATGCTGACTTGGCCAGAGAAAGTCAAGTTTGCTATTGGATTGCTGCCAGCTATTCTTGGCGGGCAGGATTATGTTGAGGCCCAAGATGGTTTATCTGTTCAAGAGTGGATGAGAAAGCAGGGTGTACCTGAGCGAGTAACTGATGAGGTGTTCATAGCGATGTCAAAGGCCCTAAACTTCATCAACCCTGATGAACTTTCAATGCAGTGTATCTTGATAGCTTTAAACCGATTTCTTCAGGAGAAGCATGGTTCAAAAATGGCCTTTTTGGACGGGAATCCCCCAGAAAGATTCTGTATGCCAATCGTTGATCATATTCTATCCTTGGGTGGTGAAGTTCATCTCAATTCTCGCATTCAAAAAATTGAGCTGAATGATGAAGGGACAGTAAAGAATTTGTTATTAAATAATGGGAAGGTGATTGAAGGAGATGCTTATGTGCTTGCAACTCCAGTTGATATCCTGAAGCTTCTTCTGCCTAACGACTGGAAAGAAATTCTATATTTCAAGAAATTGGAGAAACTGGTTGGAGTTCCGGTCATAAATATTCACATATGGTTTGATAGAAAACTGAAGAACACGTATGACCACCTACTCTTTAGCAGAAGTCCACTTCTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAGCCCAAACCAGTCAATGCTGGAGTTGGTTTTTGCACCAGCTGAAGAATGGATTTCACGCAGTGATGAAGATATTATTGAGGCCACAATGAAGGAACTTTCCAAACTCTTTCCGGATGAAATTTCCGCAGACCAAAGCAAAGCAAAGATAGTCAAGTACCATGTTGTTAAAACACCAAGGTCTGTTTACAAAACTGTTCCAAATTGTGAGCCTTGCCGTCCTGCACAAAGATCTCCCATAGAGGGTTTCTATTTAGCTGGTGATTACACAAAACAAAAGTATTTAGCTTCAATGGAAGGTGCTGTTCTTTCCGGAAAGCTCTGTGCGCAGGCTATTGTACAGGATTCTGAGCTGCTTGTTGGACGGGAGCAGAGAAGGAGGGTTCAAGCAAGAGTTTAA 1692 0.4255 MGTSDIGPAPGFGYRNTSSQKISLAFGGSESMGLKFGLPCTRSFKSSLRKNGFPLQVVCIDYPRPELENTVNFLEAAYLSSTFRASSRPTKPLEVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPNKPGQFSRFDFPEVLPAPLNGIWAILRNSEMLTWPEKVKFAIGLLPAILGGQDYVEAQDGLSVQEWMRKQGVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERFCMPIVDHILSLGGEVHLNSRIQKIELNDEGTVKNLLLNNGKVIEGDAYVLATPVDILKLLLPNDWKEILYFKKLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSPNQSMLELVFAPAEEWISRSDEDIIEATMKELSKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPAQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLVGREQRRRVQARV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1938 563 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 90 552 - -
Lele23g1938 563 TIGRFAM phytoene_desat: phytoene desaturase 95 544 IPR014102 GO:0016117|GO:0016166
Lele23g1938 563 Gene3D - 90 551 IPR036188 -
Lele23g1938 563 PRINTS Flavin-containing amine oxidase signature 94 113 IPR001613 GO:0016491
Lele23g1938 563 PRINTS Flavin-containing amine oxidase signature 525 542 IPR001613 GO:0016491
Lele23g1938 563 Pfam Flavin containing amine oxidoreductase 102 543 IPR002937 GO:0016491
Lele23g1938 563 SUPERFAMILY FAD/NAD(P)-binding domain 91 545 IPR036188 -
Lele23g1938 563 PANTHER PROTOPORPHYRINOGEN OXIDASE 83 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1938 Lele-ChrLele23 22434205 22438892 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0111 21 720736 725514 Lele23g1938 23 22434205 22438892 hybridization
Lele22g0117 22 675265 680006 Lele23g1938 23 22434205 22438892 hybridization