Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0724 ATGCCTCCCTCGTATTTTCCGCTTCGTTGGGAGAGTACTGGAGATCAATGGTGGTACGCGTCGCCGATTGATTGGGCAGCGGCGAACGGTCTCTATGATCTGGTAGCGGAGCTTCTCCATCTGGACACCAATTTGCTCATTAAGCTCACCTCACTTCGTCGAATCCGCCGACTCGAAACCGTTTGGGACGACGAATCTCAATTCGACGACGTCGCGAAATGTCGGTGTCACGTTGCGAGGAATCTTCTTCGCGAATGTGAAACGGGGAAGGGAAATAACTCTCTCATTCGTGCTGGCTATGGTGGGTGGCTGCTTTACACAGCTGCGTCTGCCGGAGATGTAGATTTTGTTCAGGAATTGTTAAGGAGAGACCCATTTCTGGTGTTCGGAGAAGGAGAATATGGAGTCACTGATATATTGTATGCTGCTGCTAGAAGCAAGAACTGTGAGGTCTTCAAGATTCTTCTTCATTCTTCACTTTCGCCCAGAGATTGCAGTGTCACTGAAGCAGAATTAGATGAAAGTGATAGGATTTTCAAAGGGGACATGATGATTAGGGCCATTCATGCTGCAGCGAGAGGAGGGAATTGGGAAGTATTGAAGCAGCTTCTTGGAAGTGAAGATTCTGACATTTTAGCTCTTAGAGATTCACAAGGATCCACAGTTTTGCACGCAGCAGCGGGTAGAGGGCAAGTTGAGGTGGTGAAAAATCTACTAGAATCATCAGATATTGTCACCTCAACTGATGCACACGGGAACACGGCCTTACACGTGGCTTCTTACCGGGGTTACTTACCTGTGGTAGAGATCTTGATTCTCGCATCTCCTGAATCAGCAATGTTAACCAATCACTATGGAGACACTTTTCTTCACATGGCAGTGGCTGGTTTTAGAAGCCCAGGTTTCCAAAGACTGGATAAGCACACTGAACTAACGAATCAAGCTGTTAGTGGGAATATTGTGAACATACAGGACATTATCAATGTCAGGAACAATGAAGGAAGAACAGCTCTTCATGTAGCTGTCACTGATAAAATCCAATGTGATGTAGTGGAAATGTTAATGTCTGTCCCGTCAATCGATTTGAACATTCGTGACGCCGATGGCATGACTCCCCTTGATCTTCTGAAGCAAAAACCTCGATCAGCATCCTCTGAGATTTTGATCAAGCAGTTGATTTCAGCTGGAGGAATATCTAATTATCCTGATTATTTGGCTAGAAATGTCCTTTGTTCCCATCTGAAATCCCATGGCATTGGAAGGAGTCCTGGAACTTCTTTTAGAATCCCAGATGCAGAGATATTTCTGTACACCGGCGTCAATAAGGAATCATCGTCAGAAATCAACTATGATCAAGTAAGCGTAAAATCTAATTCTTACTCAGGTGAACTCAGCAGCACTTGTGAGTCAGCCAATTCCCCATATGACAAGTCTGGTTCTGCTAAGTTCACTACAAGGCGCTTAAAGTTTTTTCTGCGGTGGCCTAAAAAGAAAGATAGAGAAGCCGGCGGTGCCAGCTTAAAGCTGGAAGATGAAGAAGATAATTTTTCATTATATTCTTTCAGTTCAAGGAAAAACATGGAAAACATCCCAATCCCATTACGGCAAAGATACTCAAATTTCTGTTCTCTTCCAAACAACAAAAGAACACTATCTATTAGGACTTATCTCCCAAGCCCATCCACCAAAGAGAAATTTACTGCAGGCCTAACACAAGGAGTAATTCAGGTAAACCCACTCCTGGCACTTACTGGTCCTTTTCTCAAACCAAAATCATCTATGGCTTCTTCACTTACTTCCATTGATAATAAGCAAAGAGATGTTAATAATAATATCATGGGACCCTCTTTCTCCAATCCATCAATAGATGAAGGTAATAATAATACACTGCAACCCAACCATAGACAGGGTTCGTTCAGAAAGAGATTGATGAATAGGTATCTATCTTTTGGAGCACAAGGCCTGGGAATGGAAGATTCAAATAATCGTTTCAGTTCTTTAGTTGCGTAA 2010 0.4328 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETGKGNNSLIRAGYGGWLLYTAASAGDVDFVQELLRRDPFLVFGEGEYGVTDILYAAARSKNCEVFKILLHSSLSPRDCSVTEAELDESDRIFKGDMMIRAIHAAARGGNWEVLKQLLGSEDSDILALRDSQGSTVLHAAAGRGQVEVVKNLLESSDIVTSTDAHGNTALHVASYRGYLPVVEILILASPESAMLTNHYGDTFLHMAVAGFRSPGFQRLDKHTELTNQAVSGNIVNIQDIINVRNNEGRTALHVAVTDKIQCDVVEMLMSVPSIDLNIRDADGMTPLDLLKQKPRSASSEILIKQLISAGGISNYPDYLARNVLCSHLKSHGIGRSPGTSFRIPDAEIFLYTGVNKESSSEINYDQVSVKSNSYSGELSSTCESANSPYDKSGSAKFTTRRLKFFLRWPKKKDREAGGASLKLEDEEDNFSLYSFSSRKNMENIPIPLRQRYSNFCSLPNNKRTLSIRTYLPSPSTKEKFTAGLTQGVIQVNPLLALTGPFLKPKSSMASSLTSIDNKQRDVNNNIMGPSFSNPSIDEGNNNTLQPNHRQGSFRKRLMNRYLSFGAQGLGMEDSNNRFSSLVA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0724 669 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Lele23g0724 669 SUPERFAMILY Ankyrin repeat 97 375 IPR036770 -
Lele23g0724 669 Gene3D - 173 298 IPR036770 -
Lele23g0724 669 MobiDBLite consensus disorder prediction 614 635 - -
Lele23g0724 669 Pfam Ankyrin repeats (3 copies) 188 272 IPR002110 GO:0005515
Lele23g0724 669 Gene3D - 299 412 IPR036770 -
Lele23g0724 669 Gene3D - 13 171 IPR036770 -
Lele23g0724 669 SMART ANK_2a 18 47 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 100 129 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 218 247 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 134 164 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 285 325 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 183 213 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 251 280 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 368 401 IPR002110 GO:0005515
Lele23g0724 669 SMART ANK_2a 333 364 IPR002110 GO:0005515
Lele23g0724 669 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 103 259 - -
Lele23g0724 669 Pfam Ankyrin repeats (many copies) 328 375 IPR002110 GO:0005515
Lele23g0724 669 ProSiteProfiles Ankyrin repeat region circular profile. 218 240 - -
Lele23g0724 669 ProSiteProfiles Ankyrin repeat region circular profile. 251 272 - -
Lele23g0724 669 ProSiteProfiles Ankyrin repeat profile. 251 272 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0724 Lele-ChrLele23 5783163 5785986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0724 187 402 Miscellaneous Gene Families AT2G31820 28.631 4.19e-14 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0724 23 5783163 5785986 Lele23g0724 23 5783163 5785986 ECH
Lele21g1309 21 21248579 21251432 Lele23g0724 23 5783163 5785986 hybridization
Lele22g1307 22 18550895 18553849 Lele23g0724 23 5783163 5785986 hybridization