Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1307 ATGCCTCCCTCGTATTTTCCTCTTCGTTGGGAGAGCACTGGAGATCAATGGTGGTACGCGTCGCCGATTGATTGGGCGGCGGCGAACGGTCTCTACGATCTGGTAGCGGAGCTTCTCCATCTGGACGCTAATTTGCTCATTAAGCTTACCTCACTTCGTCGAATCCGCCGCCTCGAAACCGTTTGGGACGACGAATCTCAATTTGACGACGTCGCTAAATGTCGGTGTCATGTTGCGAGGAATCTTCTTCGCGAATGTGAAACGGGGAAGGGACATAACTCTCTTATTCGTGCTGGCTATGGTGGGTGGCTGCTTTACACTGCTGCGTCTGCTGGAGATGTGGATTTTGTTCAGGAATTGTTAAGGAGAGACCCATTTCTGGTGTTCGGAGAAGGAGAATATGGAGTCACTGATATACTATATGCTGCTGCTAGAAGCAAGAACTGTGAGGTCTTCAAGATTCTTCTTCATTCTTCACTTTCGCCCAGAGATTGCAGTGTCACTGAAGCAGAATTGGATGAGAGTGGCAGGATGTTCAAGAGGGACATGATGAATAGGGCCATTCATGCTGCAGCGAGAGGAGGGAATTGGGAAGTATTGAAGCAGCTTCTTGGAAGTGATTCTGACATTTTAGCTCTCAGAGATTCACAAGGATCCACAGTTTTGCACGCAGCAGCTGGTAGAGGGCAAGTTGAGGTGGTGAAAAATCTACTAGAATCATCAGAGATTGTCACCTCAACTGATGCACAAGGGAATACAGCCTTACACGTGGCTTCTTACAGGGGCTACTTTCCTGTGGTCGAGATCTTGATTCTTGCTTCTCCCGAATCAGCGATGTTAACCAATCACTATGGAGACACATTTCTTCACATGGCCGTGGCTGGTTTTAGAAGCCCAGGTTTCCAAAGACTGGACAAGCACACTGAGCTAATGAAGCAAGTTGTTAGTGGGAAGATTGTGAACATAAAGGACATTATCAATGTCAGGAACAATGGAGGAAGAACAGCTCTTCACGTAGCTGTCATTGATAACATCCAATGTGATGTAGTTGAAATGTTAATGTCTGTCCTTTCCATCGATTTGAACATTCATGACGCTGATGGCATGACTCCCCTTGATCTTCTGAAGCGAAAACCTCGATCTGCATCCTCTGAGATTTTGATCAAGCAGTTTATTTCAGCTGGAGGAATATCTAATTATCCTGATTATCTGGCTAGAAATGTCCTTCGTTCCCAGCTGAAATCCCATGGCATTGGAAGGAGTCCTGGAACTTCTTTTAGAATCCCAGATGCAGAGATATTTCTGTACACTGGTGTCGATAAGGAATCATCGTCAGAAATCAACTATGATCAGGCAAGTGTAAAATCTAATTCTTACTCGGGTGAACTCAGCAGCACTTGTGAGTCAGCCAGCTCCCCATATGACAAGTCCGGTTCTGCTAAGTTCGCTACAAGGCGCTTAAAGTTTTTTCTGCGGTGGCCTAAAAAGAAAGATAGAGAAGCCGCCGGTGCCTTAAAGCTGGACGACGAAGAGGATAATTTTTCATTATATTCTTTCAGTTCAAGGAAAAACATGGAAAACATCCCAATCCCATTAAGGCAAAGATACTCAAACTTCTGTTCTCTTCCAAACAACAAAAGAACACTATCTACGAGGACTTATCTCCCAAGTCCATCCACCAAAGAGAAATTTACAGCGGGCCTAACACAAGGCGTGATTCAGGTAAACCCACTTCTGGCACTTACTGGTCCTTTAATCAAACCCAAATCATCTATGGCTTCTTCACTTACTTCCATTGATAATAAGCAAAGAGATGTCAATAATAATATCATGGGACCCTCTTTCTCCAATCCATCAATAGATGAAGGTAATAATACACTGCAACCCAACCATAGACAGGGTTCGTTCAGAAAGAGATTGATGAACAGGTATTTATCCGTTGGAGCACAAGGCCTGGGTTTGCAAGATTCAAATAATCGTTTCAGTTCTTTAGTTACGTAA 2001 0.4433 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDANLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETGKGHNSLIRAGYGGWLLYTAASAGDVDFVQELLRRDPFLVFGEGEYGVTDILYAAARSKNCEVFKILLHSSLSPRDCSVTEAELDESGRMFKRDMMNRAIHAAARGGNWEVLKQLLGSDSDILALRDSQGSTVLHAAAGRGQVEVVKNLLESSEIVTSTDAQGNTALHVASYRGYFPVVEILILASPESAMLTNHYGDTFLHMAVAGFRSPGFQRLDKHTELMKQVVSGKIVNIKDIINVRNNGGRTALHVAVIDNIQCDVVEMLMSVLSIDLNIHDADGMTPLDLLKRKPRSASSEILIKQFISAGGISNYPDYLARNVLRSQLKSHGIGRSPGTSFRIPDAEIFLYTGVDKESSSEINYDQASVKSNSYSGELSSTCESASSPYDKSGSAKFATRRLKFFLRWPKKKDREAAGALKLDDEEDNFSLYSFSSRKNMENIPIPLRQRYSNFCSLPNNKRTLSTRTYLPSPSTKEKFTAGLTQGVIQVNPLLALTGPLIKPKSSMASSLTSIDNKQRDVNNNIMGPSFSNPSIDEGNNTLQPNHRQGSFRKRLMNRYLSVGAQGLGLQDSNNRFSSLVT 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1307 666 SMART ANK_2a 100 129 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 183 212 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 284 324 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 367 400 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 217 246 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 250 279 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 134 164 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 18 47 IPR002110 GO:0005515
Lele22g1307 666 SMART ANK_2a 332 363 IPR002110 GO:0005515
Lele22g1307 666 Pfam Ankyrin repeat 333 365 IPR002110 GO:0005515
Lele22g1307 666 ProSiteProfiles Ankyrin repeat region circular profile. 250 271 - -
Lele22g1307 666 ProSiteProfiles Ankyrin repeat profile. 250 271 IPR002110 GO:0005515
Lele22g1307 666 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Lele22g1307 666 Pfam Ankyrin repeats (3 copies) 188 271 IPR002110 GO:0005515
Lele22g1307 666 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 399 - -
Lele22g1307 666 ProSiteProfiles Ankyrin repeat region circular profile. 217 239 - -
Lele22g1307 666 Gene3D - 12 397 IPR036770 -
Lele22g1307 666 SUPERFAMILY Ankyrin repeat 105 389 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1307 Lele-ChrLele22 18550895 18553849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1307 187 401 Miscellaneous Gene Families AT2G31820 27.237 1.45e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1307 22 18550895 18553849 Lele22g1307 22 18550895 18553849 ECH
Lele22g1307 22 18550895 18553849 Lele23g0724 23 5783163 5785986 hybridization