Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1309 ATGCCTCCCTCGTTTTTTCCGCTTCGTTGGGAGAGTACTGGAGATCAATGGTGGTACGCGTCGCCGATTGATTGGGCAGCGGCGAACGGTCTCTATGATCTGGTAGCGGAGCTTCTCCATTTGGACACCAATTTGCTCATTAAGCTCACCTCACTTCGTCGAATCCGCCGACTCGAAACCGTTTGGGACGACGAATCTCAATTCGACGACGTCGCGAAATGTCGGTGTCACGTTGCGAGGAATCTTCTTCGCGAATGTGAAACGGGGAAGGGAAATAACACTCTCATTCGTGCTGGCTACGGTGGATGGCTGCTTTACACAGCTGCGTCTGCTGGAGATGTAGATTTTGTTCAGGAATTGTTAAGGAGAGACCCATTTCTAGTGTTCGGAGAAGGAGAATATGGAGTCACTGATATACTGTATGCTGCTGCTAGAAGCAAGAACTGTGAGGTCTTCAAGATTCTTCTTCATTCTTCACTTTCGCCCAGAGATTGCAGTGTCCCTGAAGCAGAATTGGATGAAAGTGGTAGGATTTTCAAAGGGGACATGATGAATAGGGCCATTCATGCTGCCGCGAGAGGAGGGAATTGGGAAGTATTGAAGCAGCTTCTTGGAAGTGAAGATTCTGACATTTTAGCTCTTAGAGATTCACAAGGATCCACGGTTTTGCACGCAGCAGCGGGTAGAGGGCAAGTTGAGGTGGTGAAAAATCTACTAGAATCATCAGAGATTGTCACCTCAACTGATGCACACGGGAACACGGCCTTACACGTGGCTTCTTACCGTGGTTACTTGCCTGTCGTAGAGATCTTGATTCTAGCATCTCCTGAATCAGCAATGTTAACCAATCACTATGGAGACACTTTTCTTCACATGGCAGTGGCTGGTTTTAAAAGCCCCGGTTTCCAAAGACTGGATAAGCACACTGAACTAACGAATCAAGTTGTTAGTGGGAATATTGTGAACATACAGGACATTATCAATGTCAGGAACAATGAAGGAAGAACAGCTCTTCATGTAGCTGTCACTGATAACATCCAATGTGATGTAGTGGAAATGTTAATGTCTGTCCCGTCAATAGATTTGAACATTCGTGATGCCGATGGGATGACTCCCCTTGATCTTCTGAAGCGAAAACCTCGATCAGCATCCTCTGAGATTTTGATCAAGCAGTTGATTTCAGCTGGAGGAATATCTAATTATCCTGATTATTTGGCTAGAAATGTCCTTCGTTCCCATCTGAAATCCCATAGCATTGGAAGGAGTCCTGGAACTTCTTTTAGAATCCCAGATGCTGAGATATTTCTGTACACCGGCGTCAATAAGGAATCATCGTCAGAAATCAACTATGATCAAGTAAGTGTAAAATCTAATTCTTTCTCAGGTGAACTCAGCAGCAGTTGTGAGTCAGCCAATTCCCCATACGACAAGTCTGGTTCTGCTAAGTTCACTACAAGGCGCTTAAAGTTTTTTCTGCGGTGGCCTAAAAAGAAAGATAGAGAAGCCAGCGGTGCCAGCTCAAAGCTGGAAGATGAAGAAGATAAATTTTCATTATATTCTTTCAGTTCAAGGAAAAACATGGAAAACATCCCAATCCCATTACGGCAAAGACACTCAAATTTCTGTTCTCTTCCAAACAACAAAAGAACACTATCTATTAGGACCTATCTCCCAAGCCCATCCACCAAAGAGAAATTTACTGCAGGCCTAACACAAGGAGTAATTCAGGTAAACCCACTTCTGGCACTTACTGGTCCTTTTCTCAAACCAAAATCATCTATTGCTTCTTCACTTACTTCCATTGATAGTAAGCAAAGAGATGTTAATAATAATATCATGGGACCCTCTTTCTCCAAGCCATCAATAGATGAAGGTAATAATAATGCACTGCAACCCAACCATAGACAGGGTTCGTTCAGAAAGAGATTGATGAATAGGTATCTATCTTTTGGAGCACAAGGCCTGGGAATGGAAGATTCAAATAATCGTTTCAGTTCTTTAGTTGCGTAA 2010 0.4353 MPPSFFPLRWESTGDQWWYASPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRCHVARNLLRECETGKGNNTLIRAGYGGWLLYTAASAGDVDFVQELLRRDPFLVFGEGEYGVTDILYAAARSKNCEVFKILLHSSLSPRDCSVPEAELDESGRIFKGDMMNRAIHAAARGGNWEVLKQLLGSEDSDILALRDSQGSTVLHAAAGRGQVEVVKNLLESSEIVTSTDAHGNTALHVASYRGYLPVVEILILASPESAMLTNHYGDTFLHMAVAGFKSPGFQRLDKHTELTNQVVSGNIVNIQDIINVRNNEGRTALHVAVTDNIQCDVVEMLMSVPSIDLNIRDADGMTPLDLLKRKPRSASSEILIKQLISAGGISNYPDYLARNVLRSHLKSHSIGRSPGTSFRIPDAEIFLYTGVNKESSSEINYDQVSVKSNSFSGELSSSCESANSPYDKSGSAKFTTRRLKFFLRWPKKKDREASGASSKLEDEEDKFSLYSFSSRKNMENIPIPLRQRHSNFCSLPNNKRTLSIRTYLPSPSTKEKFTAGLTQGVIQVNPLLALTGPFLKPKSSIASSLTSIDSKQRDVNNNIMGPSFSKPSIDEGNNNALQPNHRQGSFRKRLMNRYLSFGAQGLGMEDSNNRFSSLVA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1309 669 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Lele21g1309 669 SUPERFAMILY Ankyrin repeat 91 375 IPR036770 -
Lele21g1309 669 Pfam Ankyrin repeats (3 copies) 188 272 IPR002110 GO:0005515
Lele21g1309 669 Gene3D - 12 410 IPR036770 -
Lele21g1309 669 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 5 400 - -
Lele21g1309 669 ProSiteProfiles Ankyrin repeat region circular profile. 218 240 - -
Lele21g1309 669 ProSiteProfiles Ankyrin repeat region circular profile. 251 272 - -
Lele21g1309 669 Pfam Ankyrin repeats (many copies) 328 375 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 100 129 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 183 213 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 18 47 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 368 401 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 218 247 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 134 164 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 251 280 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 333 364 IPR002110 GO:0005515
Lele21g1309 669 SMART ANK_2a 285 325 IPR002110 GO:0005515
Lele21g1309 669 ProSiteProfiles Ankyrin repeat profile. 251 272 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1309 Lele-ChrLele21 21248579 21251432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1309 181 402 Miscellaneous Gene Families AT2G31820 27.935 6.78e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1309 21 21248579 21251432 Lele21g1309 21 21248579 21251432 ECH
Lele21g1309 21 21248579 21251432 Lele23g0724 23 5783163 5785986 hybridization