Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0697 ATGGCGTGGCCAGATATCTTCCTGGTTGCAACATGTTCTTTAGGATCCGTCACTCTTCTTAAAGCTTTAATCTCTTTTGTGAGGTGGGTTTGGGTTATGTTTTTGAGGCCACCCAAGGATCTCAAAACCTACGGTTCGTGGGCTATCGTCACCGGTTCGACCGATGGGATTGGGAAAGCCATTTCCATGGAATTGGCTTCCAAAGGACTCAACATCCTTCTGGTCGGTCGAATCCCTAAAAAGCTCGAAGCCACGTCGAAGGAGATAAGAGACAGACATGGCGAACACGTTGAAGTAAAGCTTGTTGTGATAGACTTTGAGAAAGTTAATGATGGAGAAGAAATAGTGAAGAAGATGAGTGAAGAAACAGAAGGTTTAGATGTGGGGGTGCTGGTAAATAACGTAGGCATGGCAAGCCCTTATCCGAGGTACTTTCATGAAGATGATTTGGAATTTATGGAAGCGATTATCAAAGTGAATTTGGAAGCAATAACTTGGGTTACAAAGGCTGTGATTGAAAGAATGATCAGAAAGAAAAAAGGAGTCATCGTCAACATTGGATCTGGTTCATGCTCTATGATTCCTTCATATCCTCTGTGCACACTCTATTCTGCTACAAAGGCATATTTTTGGATGTTCTCAAAATGCATCGGTTTGGAATACAAATCACAAGGGATTGACATTCAGTGCCAGGTACCAATGTTTGTGGCAACGAAGATGGTAAAACTAAAGACATCCTTATTTATTCCAAGTGCTAAGGATTATAGCAAAGATTGCATCAGATGGTTTGGTTATTATGAGAGTATATGTGTGCCCTACATTTTCCATTCTCTTCAATGTCTTCTCATACGAATGGTTCCTCATTCACTTGTGAATTGGTATCTGATGCGACTACATCTGTACCTGCGCAAAAGAGGACTCGCCAAGCATTCCAACAAGCTCAAAACATTACCAGCATCTCAAGTAAATTAA 972 0.4136 MAWPDIFLVATCSLGSVTLLKALISFVRWVWVMFLRPPKDLKTYGSWAIVTGSTDGIGKAISMELASKGLNILLVGRIPKKLEATSKEIRDRHGEHVEVKLVVIDFEKVNDGEEIVKKMSEETEGLDVGVLVNNVGMASPYPRYFHEDDLEFMEAIIKVNLEAITWVTKAVIERMIRKKKGVIVNIGSGSCSMIPSYPLCTLYSATKAYFWMFSKCIGLEYKSQGIDIQCQVPMFVATKMVKLKTSLFIPSAKDYSKDCIRWFGYYESICVPYIFHSLQCLLIRMVPHSLVNWYLMRLHLYLRKRGLAKHSNKLKTLPASQVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0697 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 303 IPR036291 -
Lele23g0697 323 Gene3D - 41 260 - -
Lele23g0697 323 CDD 17beta-HSD1_like_SDR_c 45 287 - -
Lele23g0697 323 PIRSF 11-beta-HSD1 2 309 - -
Lele23g0697 323 PANTHER RH59310P 7 313 - -
Lele23g0697 323 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 41 270 - -
Lele23g0697 323 Pfam short chain dehydrogenase 47 242 IPR002347 -
Lele23g0697 323 PRINTS Glucose/ribitol dehydrogenase family signature 224 241 IPR002347 -
Lele23g0697 323 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Lele23g0697 323 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Lele23g0697 323 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Lele23g0697 323 PRINTS Glucose/ribitol dehydrogenase family signature 126 137 IPR002347 -
Lele23g0697 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Lele23g0697 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 IPR002347 -
Lele23g0697 323 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0697 Lele-ChrLele23 5414503 5417749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0697 14 313 Lipid Metabolism Gene Families AT1G67730 45.847 1.43e-98 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0697 23 5414503 5417749 Lele23g0697 23 5414503 5417749 ECH
Lele21g1332 21 21748124 21755523 Lele23g0697 23 5414503 5417749 hybridization
Lele22g1327 22 18997600 18998081 Lele23g0697 23 5414503 5417749 hybridization