Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1327 ATGTTTTTAAGGCCAGCCAAGAATCTCAAAACCTACGGTTCATGGGCTATCGTCACCGGTTCGACTGATGGAATCGGGAAAGCCATTGCCATGGAATTGGTTTCCAAGGGTCGAAACCCTAAAAAGCTCGAAGCCACATCGAAGGAGATAAGAGTCAGACATGGCGAACATGGATGGCAAGTCCTTATGTACTTTCATGAGGATGGTTTGGAGTTTATGGAAGCAATTACCAAAGTGAATTTGGAAGCAATAACTTGGGTGACAAAGACTGTGATTGCAAGAATGATCAGAAAGAAAAAAGGAGTTATCGTCAACATTGGATCTGGTTCATGCTCTATGATTCCCTCATATCCTCTGTGCACACTCTATGCTGCTACGAAAGCGTAA 387 0.4341 MFLRPAKNLKTYGSWAIVTGSTDGIGKAIAMELVSKGRNPKKLEATSKEIRVRHGEHGWQVLMYFHEDGLEFMEAITKVNLEAITWVTKTVIARMIRKKKGVIVNIGSGSCSMIPSYPLCTLYAATKA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1327 128 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 128 IPR036291 -
Lele22g1327 128 PRINTS Glucose/ribitol dehydrogenase family signature 95 111 IPR002347 -
Lele22g1327 128 PRINTS Glucose/ribitol dehydrogenase family signature 15 32 IPR002347 -
Lele22g1327 128 PRINTS Glucose/ribitol dehydrogenase family signature 123 128 IPR002347 -
Lele22g1327 128 PANTHER RH59310P 62 128 - -
Lele22g1327 128 Pfam short chain dehydrogenase 67 128 IPR002347 -
Lele22g1327 128 Gene3D - 8 60 - -
Lele22g1327 128 Gene3D - 61 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1327 Lele-ChrLele22 18997600 18998081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1327 2 127 Lipid Metabolism Gene Families AT1G67730 36.842 8.31e-34 118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1327 22 18997600 18998081 Lele22g1327 22 18997600 18998081 ECH
Lele22g1327 22 18997600 18998081 Lele23g0697 23 5414503 5417749 hybridization
Lele22g1327 22 18997600 18998081 Lele24g1286 24 18841763 18843861 hybridization