Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1332 ATGGTTCCACAGGTATGTTGCGATGTTGTCGAGATGCATGAATTTGGAGTACGCAAGGAATTGATATCCAGTGTCAGGATCGAGATTGGTGTTGTTGGCTATCTTTTATCTTCTTGGTCAATATCTGGGTCGAATGGAAAGGGTGGTGATGGTCCCGATAATGAATGGCTTTTGGATAAATTGTTAGAGGAGTTTGATATTATCAAGAAGGGGGTTAAAGAATATAAACCAAGTCCACGGGGTGGGCATCGAAACGTTTGTGATTCAATCTTGGCGTACGAGTCACCTGGTGAGAGTAGTGGTGTGAAGTATAGACAGTTTCAGAGTGCCCCTGTCAAGGCAAATAAAGGTAGGTGTACTGAAAAGGACCGTGGGGAAGATGAAGAGGTACATGATGAGACATATTGGCTGGAGCATATAGCTCTCTATAAGCGTGTAGAAGCTGAAATAGACGAGAGAACTCAACTGTTGTGGGTATACATGGCAATGGAATGGTCAGAAATCTTTCTAGTGGCAACATGCTCCTTAGGATTCATTTCTCTTTCCAAAGCTTTCATCCATTTTGTGAGGTGGGTGTGGGTTATGTTTTTGAGGCCAGCCAAGGATCTCAAAACCTATGGTTCATGGGCTGTTGTCACCGGTTCGACTGATGGAATCGGGAAAGCCATTTCCATGGAATTAGCTTCCAAAGGACTCAACATCCTTCTCGTTGGTCGAAACCCTAAAAAGCTGGAAGCCACATCGAAGGAGATAAGAGACAGACATGGCAAACATGTGGAAGTGAAGCTTGTGGCAATAGACTTTGAGAAAGTTAATGGTGGGGAAGTAGTGAAGAAGATCGAGGAAGCAACAGAAGGTTTAGATGTGGGGGTTCTGGTGAATAACGCAGGCATAGCAAACCCTTATCCGAGGTTTTTTCATGAAGAAGACTTCGAGTTTACCGAAGCGATTATCAAAGTGAACGTAGAAGCAATAACGTGGGTGACAAAGGCAGTGATTAAAGGAATGGTCAGAAAGAAAAAAGCAGCCATCATTAATATTGGTTCTGCTTCTTGTTTTGTAGTTCCTTCGTATCCAATGTTTTCACTCTATACTGCTACAAAAGCATACTTTGCGGTGTTCTTAAGAGTCATTGGTTTAGAATACAAAGCACAAGGAATTGATGTGCAGTGTCAGGTACCACTGTTTGTAGCAACGAAGCTGGCAAAACTAAAGGCGTCTTTAATGGTCGCAAGCACAGAGGAATATAGCAGACGTTGCATCAGATGGTTTGGTTATAAGGAAAGCATATGCGTTCCCTATCTCATACATTCTCTGCAGTGCCTTTACCTCCAAATGCTTCCCCATTCATTTCTCAATTGGTGTATCATGCGATATCGTCTTTCCAAGCGCAAAAGAAGACTGGCCAAGTGTTCACAAACTCAGCAAATTGAGCATATACCATGTAGTAGTTATCTACAGTAA 1464 0.4269 MVPQVCCDVVEMHEFGVRKELISSVRIEIGVVGYLLSSWSISGSNGKGGDGPDNEWLLDKLLEEFDIIKKGVKEYKPSPRGGHRNVCDSILAYESPGESSGVKYRQFQSAPVKANKGRCTEKDRGEDEEVHDETYWLEHIALYKRVEAEIDERTQLLWVYMAMEWSEIFLVATCSLGFISLSKAFIHFVRWVWVMFLRPAKDLKTYGSWAVVTGSTDGIGKAISMELASKGLNILLVGRNPKKLEATSKEIRDRHGKHVEVKLVAIDFEKVNGGEVVKKIEEATEGLDVGVLVNNAGIANPYPRFFHEEDFEFTEAIIKVNVEAITWVTKAVIKGMVRKKKAAIINIGSASCFVVPSYPMFSLYTATKAYFAVFLRVIGLEYKAQGIDVQCQVPLFVATKLAKLKASLMVASTEEYSRRCIRWFGYKESICVPYLIHSLQCLYLQMLPHSFLNWCIMRYRLSKRKRRLAKCSQTQQIEHIPCSSYLQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1332 487 Gene3D - 203 436 - -
Lele21g1332 487 PRINTS Glucose/ribitol dehydrogenase family signature 209 226 IPR002347 -
Lele21g1332 487 PRINTS Glucose/ribitol dehydrogenase family signature 336 352 IPR002347 -
Lele21g1332 487 PRINTS Glucose/ribitol dehydrogenase family signature 385 402 IPR002347 -
Lele21g1332 487 PRINTS Glucose/ribitol dehydrogenase family signature 287 298 IPR002347 -
Lele21g1332 487 PRINTS Glucose/ribitol dehydrogenase family signature 364 383 IPR002347 -
Lele21g1332 487 PANTHER RH59310P 167 473 - -
Lele21g1332 487 CDD 17beta-HSD1_like_SDR_c 207 448 - -
Lele21g1332 487 Pfam short chain dehydrogenase 209 403 IPR002347 -
Lele21g1332 487 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 203 431 - -
Lele21g1332 487 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 462 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1332 Lele-ChrLele21 21748124 21755523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1332 176 476 Lipid Metabolism Gene Families AT1G67730 46.026 8.40e-90 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1332 21 21748124 21755523 Lele21g1332 21 21748124 21755523 ECH
Lele21g1332 21 21748124 21755523 Lele23g0697 23 5414503 5417749 hybridization
Lele21g1332 21 21748124 21755523 Lele24g1286 24 18841763 18843861 hybridization