Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0683 ATGAATCCTCTTTGCTGCATTGCTCCTGTTTCGATCGATCGGGACCGGGCAAACCCTGTTGTGCCCAAATCACCTGCACAGTGTCAGTTAGGAGTGGATGCATCTGTGAAAACTGTTAACTATGGTTCGAAACCCAGCTTTTCTACTGTTGATTCGTCGGTTGGTACTGATTCCAACAAAGCGTCGTTCACTTCGAATCATGACGAGGAGGATGTGGCGGTGGTCAGTGAAGCTAGAGATTCCAAGGTGTTCAGTGGCACTGTAGCTGGGATTTTGTACAAGTGGGTGAATTATGGTAAGGGTTGGAGGTCCAGGTGGTTCATGCTTGAAGATGGGGTGCTTTCTTATTACAAGATTCATGGTCCTGATAAGATTTGGATGAGTCCGGCTAGAGATAGGAGTGTCAGGATGATCGGTGAGGAGTCATCTAAATACATGAAGAAAGCAAATTGGAATCTAAATCGGCAGGGGGGCGCCACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTGCCAGCAAGTCTGATGATAAGCGACTTTCCATATTTACTGGCACAAAAACTCTTCACTTGTGTTGTATATCTAGAGAAGACAGAGCTATGTGGATTGAAGCTCTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTCTAACAAGTAGTGATCTTGCTACCACAGAAGATATTGTAGTTTCCACAGAAAAATTGCGATCTCGATTATCACAAGAAGGCATATCTGAAGCAATTATTAAAGACTGTGAATCAATTATGCTTTCTGAAGTCTCTTACCTTCAAGACCGCCTGAAATTTCTTCATCAAAAACACATGATATTGCTGGACACCTTAAAACAGCTAGAGTCTGAGAAAATAGAGTTGGAAACTACTGTTGTGGATGAAACAAAGGAACGTGAGTCATATTGTGGACAAGGGAACAGAAGGTTTAGTGATTTCTATTCTGTCATGTCAGAAGGCAGTGCTTCCGATTCTGTAGCAGATAATGAAAGCCAGGATGGAGGGGATGTTGAAACAGATGATGATGATGAAACATATTTTGACACAAACGACTTTTTGTTTTCAGATGCTTTAAGAAGTGCATCCTACCGAAGTAGGGAAGGTGTGGGAAATTCTTGTATATATGACAGAGATTCTTTCTTTTCTGATGGTTTGCACGGGCTTGAGAAGGGAATCATAGATGTAAAATATCCTTATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGATAAGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATCGGGAAGGATCTTTCTGGAGTTTGTCTGCCTGTTTATTTTAATGAGCCACTCTCTTCATTACAAAAGTGCTTTGAAGACATGGAGTATTCATACTTGGTTGATAGAGCGTTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCGGCTTTTGCTGTGTCTGGGTATGCTTCAACAGAAGGTCGACAGTGTAAACCTTTTAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTTAGGTTTTTCTCTGAAAAGGTTAGTCATCATCCGATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAATTCTGGGCAGATTCCAATTTGAAAGGCAAGTTTTGGGGGCGTTCTATCCAGCTAGATCCTGTGGGTGTCCTCACTCTTCAGTTTGAAGATGGTGAAACATTCCAATGGAGCAAGGTCACCACTTCAATATACAATATCATACTAGGAAAAATTTATTGTGATCACTATGGGACCATGCGCATCAAAGGCAGTGGCAACTACTCCTGCAAACTCAAGTTCAAAGAGCAGTCTATAATTGACCGAAATTCACATCAGGTCCATGGGTTTGTTCAAGACAATACAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGATCCAACTACGAAGCCTAAAGGATATGATCCAATGACAGAAGCTGTATTATTATGGGAAAGAGACCCCTACATTACCAAGACAAGATACAACCTCTCTCCTTTCGCAATATCATTGAATGAAATAACACCTGGTTTATCGGAGAAGTTGCCTCCAACTGATTCAAGGCTGAGACCAGATCAAAGGCATCTAGAAAATGGAGAATACGAGCTGGCAAATGCCGAGAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAGGATGCAGGAAAGAGGGTGGCAACCTAGATGGTTCCGAAAAGACGAGGATGGTTCTTACAGATATGTCAGCGGCTATTGGGAAGCGAGAGAGAAAAAGAATTGGGATGGGATTCCTGATATATTTGGGCAGTCATGTGATTTGCCTTCCTGTTCTGAAGAGCCTCTCTCATAA 2421 0.4221 MNPLCCIAPVSIDRDRANPVVPKSPAQCQLGVDASVKTVNYGSKPSFSTVDSSVGTDSNKASFTSNHDEEDVAVVSEARDSKVFSGTVAGILYKWVNYGKGWRSRWFMLEDGVLSYYKIHGPDKIWMSPARDRSVRMIGEESSKYMKKANWNLNRQGGATKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLCCISREDRAMWIEALQSAKDLFPRSLTSSDLATTEDIVVSTEKLRSRLSQEGISEAIIKDCESIMLSEVSYLQDRLKFLHQKHMILLDTLKQLESEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSASDSVADNESQDGGDVETDDDDETYFDTNDFLFSDALRSASYRSREGVGNSCIYDRDSFFSDGLHGLEKGIIDVKYPYVKRRDNLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDMEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNSHQVHGFVQDNTTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAVLLWERDPYITKTRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARRMQERGWQPRWFRKDEDGSYRYVSGYWEAREKKNWDGIPDIFGQSCDLPSCSEEPLS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0683 806 Coils Coil 734 754 - -
Lele23g0683 806 Pfam Oxysterol-binding protein 427 780 IPR000648 GO:0008289
Lele23g0683 806 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 87 779 IPR000648 GO:0008289
Lele23g0683 806 SMART PH_update 86 219 IPR001849 -
Lele23g0683 806 SUPERFAMILY Oxysterol-binding protein-like 422 793 IPR037239 -
Lele23g0683 806 MobiDBLite consensus disorder prediction 330 351 - -
Lele23g0683 806 Pfam Pleckstrin homology domain 90 214 - -
Lele23g0683 806 ProSiteProfiles PH domain profile. 85 217 IPR001849 -
Lele23g0683 806 FunFam oxysterol-binding protein-related protein 1D isoform X1 512 685 - -
Lele23g0683 806 Coils Coil 273 307 - -
Lele23g0683 806 SUPERFAMILY PH domain-like 88 221 - -
Lele23g0683 806 Gene3D - 723 787 - -
Lele23g0683 806 Gene3D - 512 678 - -
Lele23g0683 806 CDD PH_ORP_plant 88 221 - -
Lele23g0683 806 FunFam Oxysterol-binding protein-related protein 2A 723 793 - -
Lele23g0683 806 Gene3D - 85 219 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0683 Lele-ChrLele23 5296877 5304856 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0683 23 5296877 5304856 Lele23g0683 23 5296877 5304856 ECH
Lele21g1341 21 21856146 21862087 Lele23g0683 23 5296877 5304856 hybridization
Lele22g1338 22 19165502 19171626 Lele23g0683 23 5296877 5304856 hybridization