Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1338 ATGGCCTGGCTTAACCTACGGTTTGGAGTTGGAGGGAGAGCAGAGGTCAGCTGCTTGTTGGTGTTTGAGGTGATTCATGGTGTGTCTTTTGTGGTTTTTTACTTGATCATGAATCCTCTTTGCTGCATTGCTCCTGTTTCGATCGATCGGGACCGGGCCAACCCTGTTGTGCCTAAATCACCTGCACAGTGTCAGTTAGGAGTGGATTCATCTGTGAAAACTGTTAACTACGGTTCGAAACCCAGCTTTTCTACTGTTGATTCGTCGGTTGGTACTGATTCCAACAAAGCGTCGTTTACTTCGAATCACGATGAGGAGGAGGTGGTGGTGGTCAGTGACGCTAGAGATTGCAAAGTGTTCAGTGGCACTGTAGCTGGGATTTTGTACAAGTGGGTGAATTATGGTAAGGGTTGGAGGTCCAGGTGGTTCATGCTTGAAGATGGGGTGCTTTCTTATTACAAGATTCATGGTCCTGATAAGATTTGGATGAGTCCGGCTAGAGATAGGAGTGTCCGGGTGATCGGTGAGGAGTCATCGAAATACATGAAGAAAGCAAATTGGAATCTAAATCGGCAGGGGGGCGCCACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTGCCAGCAAGTCAGATGATAAGCGACTTTCCATATTTACTGGCACAAAAACTCTTCACTTGCGTTGTATATCTAGAGAAGACAGAGCTATGTGGATTGAAGCTCTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTCTAACAAGCAGTGATCTTGCTACCTCAGAAGATATTGTAGTTTCCACAGAAAAATTGCGATCTCGACTATCACAAGAAGGCATATCTGAAGCAATTATTAAAGACTCTGAATCAATTATGCTTTCTGAAGTCTCTTACCTTCAAGACCGCCTGAAATTTCTTCATCAAAAACATGTGATCTTGCTGGACACCTTAAAACAGCTAGAGACTGAGAAAATAGAGTTGGAAACTACTGTTGTTGATGAAACAAAGGAACGTGAGTCGTATTGTGGACAGGGGAACAAAAGGTTTAGTGATTTCTATTCTGTTATGTCCGAAGGCAGTGCTTCCGACTCTGTAGCAGATAATGAAAGCCAGGATGGAGGGGATGTTGAAACAGAAGATGATGATGGAACATATTTTGACACAAACGACTTTCTGTCTTCAGATGCTTTAAGAAGTACATCCTACCGAAGTAGGGAAGGTTTGGGAAATTCTTGTATATATGACAGAGATTCTTTCTCTTCTGATGGTTTGTACGGGCTTGAGAATGGAATTAAAGATGTAAAATATCCATATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGACAAGCCTGTTGGTTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGCCTGCCTGTTTATTTTAATGAGCCACTGTCTTCATTACAAAAGTGCTTTGAAGACTTGGAGTATTCATACTTGGTTGATAGATCATCGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATCCTAAATATTGCGGCTTTTGCTGTGTCTGGGTATGCTTCAACAGAAGGTCGACAGTGCAAACCTTTTAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTTAGGTTTTTCTCTGAAAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGGTGGAAATTCTGGGCAGATTCCAATTTGAAAGGCAAGTTTTGGGGACGTTCTATCCAGCTAGATCCTCTGGGTGTCCTCACTCTTCAGTTTGAAGATGGTGAAACATTTCAATGGAGCAAGGTCACGACTTCAATATACAATATCATACTAGGAAAAATTTATTGCGATCACTATGGGACCATGCGCATCAAAGGCAGTGGCAACTACTCCTGCAAGCTCAAGTTCAAAGAGCAGTCTATAATTGACCGAAGTCCACATCAGGTCCATGGGTTTGTACAAGACAATAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGATCCAACTACAAAGCCTAAAGGATATGATCCAATGACAGAAGCTGTATTATTATGGGAAAGGGACACCTACATTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAACACCTGGTTTATCGGAGAAGTTGCCTCCAACTGATTCAAGGCTGAGACCAGATCAAAGGCATCTAGAAAATGGAGAATACGAGTTGGCAAATGCTGAGAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAGTATGCAGGAAAGAGGGTGGCAGCCTAGATGGTTCCGAAAAGATGAGGATGGTTCTTACAGATATGTTGGCGGCTATTGGGAAGCGAGAGAGAAAATAAATTGGGATGGGATTCCTGATATATTTGGGCAGTCATGTGACTTGCCTTCCTGTTCTGAAGAGACTCTACCCTAA 2529 0.4255 MAWLNLRFGVGGRAEVSCLLVFEVIHGVSFVVFYLIMNPLCCIAPVSIDRDRANPVVPKSPAQCQLGVDSSVKTVNYGSKPSFSTVDSSVGTDSNKASFTSNHDEEEVVVVSDARDCKVFSGTVAGILYKWVNYGKGWRSRWFMLEDGVLSYYKIHGPDKIWMSPARDRSVRVIGEESSKYMKKANWNLNRQGGATKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCISREDRAMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGISEAIIKDSESIMLSEVSYLQDRLKFLHQKHVILLDTLKQLETEKIELETTVVDETKERESYCGQGNKRFSDFYSVMSEGSASDSVADNESQDGGDVETEDDDGTYFDTNDFLSSDALRSTSYRSREGLGNSCIYDRDSFSSDGLYGLENGIKDVKYPYVKRRDNLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRSSEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPLGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRSPHQVHGFVQDNRTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAVLLWERDTYITKTRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARSMQERGWQPRWFRKDEDGSYRYVGGYWEAREKINWDGIPDIFGQSCDLPSCSEETLP 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1338 842 SMART PH_update 122 255 IPR001849 -
Lele22g1338 842 MobiDBLite consensus disorder prediction 366 390 - -
Lele22g1338 842 FunFam Oxysterol-binding protein-related protein 2A 759 829 - -
Lele22g1338 842 FunFam oxysterol-binding protein-related protein 1D isoform X1 548 721 - -
Lele22g1338 842 Coils Coil 770 790 - -
Lele22g1338 842 Gene3D - 548 714 - -
Lele22g1338 842 Gene3D - 759 820 - -
Lele22g1338 842 SUPERFAMILY PH domain-like 124 258 - -
Lele22g1338 842 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 123 815 IPR000648 GO:0008289
Lele22g1338 842 ProSiteProfiles PH domain profile. 121 253 IPR001849 -
Lele22g1338 842 CDD PH_ORP_plant 124 257 - -
Lele22g1338 842 MobiDBLite consensus disorder prediction 376 390 - -
Lele22g1338 842 Coils Coil 323 343 - -
Lele22g1338 842 Pfam Oxysterol-binding protein 463 816 IPR000648 GO:0008289
Lele22g1338 842 Gene3D - 121 255 IPR011993 -
Lele22g1338 842 SUPERFAMILY Oxysterol-binding protein-like 458 829 IPR037239 -
Lele22g1338 842 Pfam Pleckstrin homology domain 126 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1338 Lele-ChrLele22 19165502 19171626 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1338 22 19165502 19171626 Lele22g1338 22 19165502 19171626 ECH
Lele22g1338 22 19165502 19171626 Lele23g0683 23 5296877 5304856 hybridization
Lele22g1338 22 19165502 19171626 Lele24g1295 24 18953003 18958783 hybridization