Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1341 ATGGGCGTGGCCCGCCCCGGCCCAACCGACAGCTGCTTTTTGGTGTTTGAGGTGATTCATGGTGTGTTTTTTGCTCGTGTTTTTTACTTGATCATGAATCCTCTTTGCTGCATTGCTCCTGTTTCGATCGATCGGGACAGGGCAAACCCTGTTGTGCCCAAATCACCTGCACAGTGTCAGTTAGGAGAGGATGCATCTGTGAAAACTGTTAACTATGGTTCGAAACCCAGCTTTTCTACTGTTGATTCGTCGGTTGGTACTGATTCCAACAAAGCGTCGTTCACTTCGAATCACGACGAGGAGGATGTGGCGGTGGTCAGTGAAGCTAGAGATTCCAAGGTGTTCAGTGGCACTGTAGCTGGGATTTTGTACAAGTGGGTGAATTATGGTAAGGGTTGGAGGTCCAGGTGGTTCATGCTTGAAGATGGGGTGCTTTCTTATTACAAGATTCATGGTCCTGATAAGATTTGGATGAGTCCGGCTAGAGATAGGAGTGTCAGGATGATCGGTGAGGAGTCATCTAAATACATGAAGAAAGTAAATTGGAATCTAAATCGGCAGGGGGGCGCCACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTGCCAGCAAGTCTGATGATAAGCGACTTTCCATATTTACTGGCACAAAAACTCTTCACTTGTGTTGTATATCTAGAGAAGACAGAGCTATGTGGATTGAAGCTCTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTCTAACAAGTAGTGATCTTGCTACCTCAGAAGATATTGTAGTTTCCACAGAAAAATTGCGATCTCGATTATCACAAGAAGGCATATCTGAAGCAATTATTAAAGACTGTGAATCAATTGTGCTTTCTGAAGTCTCTTACCTTCAAGACCGCCTGAAATTTCTTCATCAAAAACACATGATATTGCTGGACACCTTAAAACAGCTAGAGTCTGAGAAAATAGAGTTGGAAACTACTGTTGTGGATGAAACAAAGGAACGTGAGTCATATTGTGGACAAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCAGAAGGCAGTGCTTCCGATTCAGTAGCAGATAATGAAAGCCAGGATGGAGGGGATGTTGAAACAGATGATGATGATGGAACATATTTTGACACAAACAACTTTTTATCTTCAGATGCTTTAAGAAGTGCATCCTACCGAAGTAGGGAAGGTGTGGGAAATTCTTGTATATATGACAGAGATTCTTTCTTTTCTGATGGTTTGCACGGGCTTGAGAAGGGAATCAAAGATGTAAAATATCCTTATGTAAAAAGAAGGGATGATTTACCAGAACCAAAAGAGAAAGATAAGCCTGTTGGATTGTGGTCAATTATTAAAGACAATATCGGGAAGGATCTTTCTGGAGTTTGTCTGCCTGTTTATTTTAATGAGCCACTCTCTTCATTACAAAAGTGCTTTGAAGACATGGAGTATTCATACTTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCGGCTTTTGCTGTGTCTGGGTATGCTTCAACAGAAGGTCGACAGTGTAAACCTTTTAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTTAGGTTTTTCTCTGAAAAGGTTAGTCATCATCCGATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAATTCTGGGCAGATTCCAATTTGAAAGGCAAGTTTTGGGGGCGTTCTATCCAGCTAGATCCTGTGGGTGTCCTCACTCTTCAGTTTGAAGATGGTGAAACATTCCAATGGAGCAAGGTCACCACTTCAATATACAACATCATACTAGGAAAAATTTATTGTGATCACTATGGGACCATGCGCATCAAAGGCAGTGGCAACTACTCCTGCAAACTCAAGTTCAAAGAGCAGTCTATAATTGACCGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAATACAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGATCCAACTACGAAGCCTAAAGGATATGACCCAATGACAGAAGCTGTATTATTATGGGAAAGAGACCCCTACATTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAACACCTGGTTTATCGGAGAAGTTGCCTCCAACTGATTCAAGGCTGAGACCAGATCAAAGGCATCTAGAAAATGGAGAATACGAGCTGGCAAATGCCGAGAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAGGATGCAGGAAAGAGGGTGGCAACCTAGATGGTTCCGAAAAGACGAGGATGGTTCTTACAGATATGTTGGCGGCTATTGGGAAGCGAGAGAGAGAAAGAATTGGGATGGGATTCCTGATATATTTGGGCAGTCATGTGATTTGCCTTCCTGTTCTGAAGAGCCTCTCTCATAA 2514 0.4252 MGVARPGPTDSCFLVFEVIHGVFFARVFYLIMNPLCCIAPVSIDRDRANPVVPKSPAQCQLGEDASVKTVNYGSKPSFSTVDSSVGTDSNKASFTSNHDEEDVAVVSEARDSKVFSGTVAGILYKWVNYGKGWRSRWFMLEDGVLSYYKIHGPDKIWMSPARDRSVRMIGEESSKYMKKVNWNLNRQGGATKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLCCISREDRAMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGISEAIIKDCESIVLSEVSYLQDRLKFLHQKHMILLDTLKQLESEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSASDSVADNESQDGGDVETDDDDGTYFDTNNFLSSDALRSASYRSREGVGNSCIYDRDSFFSDGLHGLEKGIKDVKYPYVKRRDDLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDMEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNTTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAVLLWERDPYITKTRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARRMQERGWQPRWFRKDEDGSYRYVGGYWEARERKNWDGIPDIFGQSCDLPSCSEEPLS 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1341 837 Gene3D - 754 816 - -
Lele21g1341 837 SUPERFAMILY PH domain-like 119 253 - -
Lele21g1341 837 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 118 810 IPR000648 GO:0008289
Lele21g1341 837 Coils Coil 304 338 - -
Lele21g1341 837 Pfam Oxysterol-binding protein 458 811 IPR000648 GO:0008289
Lele21g1341 837 SMART PH_update 117 250 IPR001849 -
Lele21g1341 837 MobiDBLite consensus disorder prediction 361 383 - -
Lele21g1341 837 Gene3D - 543 709 - -
Lele21g1341 837 FunFam Oxysterol-binding protein-related protein 2A 754 824 - -
Lele21g1341 837 Gene3D - 116 250 IPR011993 -
Lele21g1341 837 SUPERFAMILY Oxysterol-binding protein-like 453 824 IPR037239 -
Lele21g1341 837 Pfam Pleckstrin homology domain 121 245 - -
Lele21g1341 837 CDD PH_ORP_plant 119 252 - -
Lele21g1341 837 FunFam oxysterol-binding protein-related protein 1D isoform X1 543 716 - -
Lele21g1341 837 Coils Coil 765 785 - -
Lele21g1341 837 ProSiteProfiles PH domain profile. 116 248 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1341 Lele-ChrLele21 21856146 21862087 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1341 21 21856146 21862087 Lele21g1341 21 21856146 21862087 ECH
Lele21g1341 21 21856146 21862087 Lele23g0683 23 5296877 5304856 hybridization
Lele21g1341 21 21856146 21862087 Lele24g1295 24 18953003 18958783 hybridization