Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0599 ATGGGAGTTATCGGAGGCACTCTGGAGTACAACGACAACAACCACCACAAGATGAAGAAGAAGCCATTTCAGACGGTGGAGCTCAAGGTCAGAATGGACTGTGATGGCTGTGAACTCAAGGTCAAGAAAGCCCTCTCTTCATTAACTGGGGTGAAGTCGGTGGAGATAAACAGGAAGTTGCAGAAGGTGACGGTGACAGGGCATGTGGAAGCAAGCAAGGTGTTGAAGAAGGCGAAGGCGACGGGGAAGAGAGCGGAGATGTGGCCGTATGTGCCGTATAACTTGGTGGCTCAGCCTTATGCGGCGCCGGCTTATGACAAGAGGGCTCCTCCTGGTTTTGTCAGAAACGTTGATGCTTCTTCTTCTTCTGCCTCCATTGGAGCACTCGGCACCAGATATGAAGATCCTTACATGACCTTCTTCAGTGATGACAACCCTAATGCTTGCTCTCTTATGTAA 459 0.5033 MGVIGGTLEYNDNNHHKMKKKPFQTVELKVRMDCDGCELKVKKALSSLTGVKSVEINRKLQKVTVTGHVEASKVLKKAKATGKRAEMWPYVPYNLVAQPYAAPAYDKRAPPGFVRNVDASSSSASIGALGTRYEDPYMTFFSDDNPNACSLM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0599 152 CDD HMA 27 86 IPR006121 GO:0046872
Lele23g0599 152 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Lele23g0599 152 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Lele23g0599 152 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 150 IPR045181 GO:0046872
Lele23g0599 152 SUPERFAMILY HMA, heavy metal-associated domain 23 89 IPR036163 GO:0046872
Lele23g0599 152 Gene3D - 10 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0599 Lele-ChrLele23 4492308 4492857 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0599 23 4492308 4492857 Lele23g0599 23 4492308 4492857 ECH
Lele23g0599 23 4492308 4492857 Lele24g1359 24 19649471 19650050 ECH
Lele21g1416 21 22634215 22637443 Lele23g0599 23 4492308 4492857 hybridization
Lele22g1406 22 19863014 19863569 Lele23g0599 23 4492308 4492857 hybridization