Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1416 ATGGGAGTTATGGGAGGCACTCTGGAGTACAACGGCAACAACCACCACAAGATGAAGAAGAAGCCATTTCAGACGGTGGAGCTCAAGGTCAGAATGGACTGTGATGGCTGTGAACTCAAGGTCAAGAAAGCCCTCTCTTCATTAACTGGGGTGAAGTCGGTGGAGATAAACAGGAAGTTGCAGAAGGTGACGGTGACAGGGCATGTGGAAGCGAGCAAGGTGTTGAAGAAGGCGAAGGCGACGGGGAAGAGAGCGGAGATGTGGCCGTATGTGCCGTATAACTTGGTGGCTCGGCCTTATGCGGCGCCGGCTTATGACAAGAGGGCTCCTCCTGGTTTTGTCAGAAACGTTGGTGCTTCTTCTTCTTCTGCCTCCATTGGAGCACTCGTCACCAGATATGAAGATCCTTACATGACCTTCTTCAGTGATGACAACCCTAACGCTTGCTCTCTTATAAACTCCAGCACTGCTGCTGAACCGAAGGTTTTCATCGGAGGAGTGGAGATCACGCAGCCCGAACTATTCAACAACGGTATGGTGATTATTCATGGCATTCAAGGTTTTGTCGCACCACTGTCTCCATTTTCTTGCGATGTAGAGAGGATTTCTTCGCACTCGTACCCGTACCATCTAGATCATCGTTCTGGTCAACACGTCCCATCCGACTCAATGCAGACCGCTATCATGCGCCTGATGATCCGAGACGCGATTCTCCGGCTCCGTAATAATGGCTTCAGCGTCCTTGCCCTCGCTATGAAGGTGAAGTACTCCGAGCTGGTCACACTCAATAACATGACGATATTCGCCGTCGACGATCTATCCATCTTCTCCGGTTCACATTCTTATATCAGCAACGTGAGATTCCACATCGTGCCGGACCATTACTTGACATTTGCGGACCTGGAGAAGCTACCGGTGGGAACAACTCTGCCGACATTGGAACGAGGCCAAACGCTGCTCATCACTACCTCCAGTGGAGTCTTGACTTCAGCGCCGATGAGGATTAACTATGTGAGGGTTAAGTTGCCGGACGTTATCCGCAACATCAAGATAGTGGTTCTCAGTGTTTTCTTGCCATTTCCACATATCAGTCCTGCAGCTGCGGCTTACGACGGTATACTTGGAGGTGAAGGAGCGGCTCATGCGTCAGCAGATCAGATGATGGAAGTAACCTGTGCTGATGTAGATGGGAATGGAAATTGCAGCGAGCCCCCAATACGTCAGGCCAAGCCGATGGTGGAGATCGAAGATCACCATGGTCTGTGA 1266 0.5087 MGVMGGTLEYNGNNHHKMKKKPFQTVELKVRMDCDGCELKVKKALSSLTGVKSVEINRKLQKVTVTGHVEASKVLKKAKATGKRAEMWPYVPYNLVARPYAAPAYDKRAPPGFVRNVGASSSSASIGALVTRYEDPYMTFFSDDNPNACSLINSSTAAEPKVFIGGVEITQPELFNNGMVIIHGIQGFVAPLSPFSCDVERISSHSYPYHLDHRSGQHVPSDSMQTAIMRLMIRDAILRLRNNGFSVLALAMKVKYSELVTLNNMTIFAVDDLSIFSGSHSYISNVRFHIVPDHYLTFADLEKLPVGTTLPTLERGQTLLITTSSGVLTSAPMRINYVRVKLPDVIRNIKIVVLSVFLPFPHISPAAAAYDGILGGEGAAHASADQMMEVTCADVDGNGNCSEPPIRQAKPMVEIEDHHGL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1416 421 CDD HMA 27 86 IPR006121 GO:0046872
Lele21g1416 421 ProSiteProfiles Heavy-metal-associated domain profile. 32 87 IPR006121 GO:0046872
Lele21g1416 421 SUPERFAMILY HMA, heavy metal-associated domain 23 89 IPR036163 GO:0046872
Lele21g1416 421 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Lele21g1416 421 Gene3D - 11 89 - -
Lele21g1416 421 PANTHER OS02G0491300 PROTEIN-RELATED 147 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1416 Lele-ChrLele21 22634215 22637443 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1416 21 22634215 22637443 Lele21g1416 21 22634215 22637443 ECH
Lele21g1416 21 22634215 22637443 Lele22g1406 22 19863014 19863569 ECH
Lele21g1416 21 22634215 22637443 Lele23g0599 23 4492308 4492857 hybridization
Lele21g1416 21 22634215 22637443 Lele24g1359 24 19649471 19650050 hybridization