Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0511 ATGAGAGCTATAATGGGTCATTCCACACATGGCGTTGAAGCTAGACATCGTTTACCTACTTCCATTGAAGACTTGAAAAGAAGATTGCCAAGAAGTAGGACGAAAGATGTGGAGAAGCCTTTCCATTTAACAAGCCAAGAAAAGAGCTCAAGATGCAAACTTTCTATCTTAAAACTCATCCTATTACTGACCATTTCTGGCACTTTTGTAACTCTTCTCTACTCTCCAGAGGTTTATAACACTAACCACTTATCAAGCTCAGGGTCTGGGTGGATATGGGGTGGCTCAGATACTCGATATATATCTAATGAGGACATTGATTGGAATGAAATATTGGAAGTAACAAGGAAGATGACTGGAAAAAATGAATTGCAAGGGGTTGGTCTTCTGAATTTCAACAATTCTGAAGTAGAGAAATGGGAGAAACTTATGCCTGATGCTAAGAACATAGTTTTGCATCTTGAGTATGCAGCAAGAAATGTCACATGGGAGTCACTATACCCAGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCGGTTTGTCCCTCTCTACCGAGTCTTAGGTCTCCCGGAACAAGGCTTAATCTGATAGCAGTGAAGCTCCCTTGTCGCCCGGGTGCAAAAAATTCGAATTGGTCTAGAGATGTTGCTAGGCTTCACCTGCAGCTTGCTGCAGCTGGGCTTGCAGCATCTTTTAAAGGAAATTACACCGTGCATTTGCTCTTCATTACCAATTGCTTTCCAATTCCAAATCTCTTTACTTGCAATGAACTTGTTGCACATGAAGGTAATGCATGGCTGTATAATCCAAACTTGAGTGTCTTGAGACAAAAAGTTCAGCTCCCAGTAGGATCTTGTGAACTTGCAATTCCCATGAGGGGTAAAGCAGAGCTGGTCTATGCTGGGAATTTACACAGAGAAGCCTATGCAACAATACTTCATTCAGCTCATGTTTATGTTTGTGGAGCCATAGCTGCTGCACAAAGCATACGCATGTCTGGATCAACCAGAGACCTTGTCATCCTTGTTGATGAGACCATAAGTGGATATCACAGAAGTGGTTTACAAGCAGCAGGATGGAAAGTAAGAATAATTCAGAGAATCAGAAACCCTAAAGCTGAGAAAGATGCATACAATGAATGGAACTACAGCAAATTCAGATTATGGCAGCTCACAGATTATGACAAGATCATATTCATTGATGCAGATTTGCTCATACTAAGAAATATAGATTTTCTCTTTGGAATGCCAGAAATTACAGCAACAGGAAACAATGCATCACTTTTTAACTCAGGTGTTATGGTGGTTGAGCCATCAAATTGTACATTCCAGCTTCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGAGATCAAGGATATTTGAATGAGATATTCACATGGTGGCATAGAATTCCAAGGCACATGAACTTTCTGAAGCATTTCTGGGTTGGTGATGAAGAAGAGAAGAAACAAATGAAGACAATGCTTTTTGGAGCAGACCCTCCAATTCTCTATGTTCTTCACTATCTTGGAATGAAGCCATGGCTGTGTTTTAGGGACTATGATTGTAACTGGAACTTCGATATCTTTCAGGAGTTCGCGAGCGATGTTGCTCATGAAAGATGGTGGAGAGTTCATGATGCCATGCCTGAGGTTTTGCAGCAGTTTTGTCTGTTGAAATCAAAGCAAAAGGCACAGTTAGAGTGGGATAGAAGGCAAGCTGAGAAAGCAAATTACACAGATGGACATTGGAGAATTAAGGTGAAAGATTGGAGATTGAAGAAATGTGTTGATAATTTGTGTAACTGGAAAAGCATGTTGAGGCATTGGGGAGAGACGAATTGGACAGATGTTGAGTCTTATTATAATCCAACACCACCTGCAATTGCTACTACCAAAAAAAACAAAGCTTCTCTTTCTGGTCTGTGA 1941 0.4055 MRAIMGHSTHGVEARHRLPTSIEDLKRRLPRSRTKDVEKPFHLTSQEKSSRCKLSILKLILLLTISGTFVTLLYSPEVYNTNHLSSSGSGWIWGGSDTRYISNEDIDWNEILEVTRKMTGKNELQGVGLLNFNNSEVEKWEKLMPDAKNIVLHLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGTRLNLIAVKLPCRPGAKNSNWSRDVARLHLQLAAAGLAASFKGNYTVHLLFITNCFPIPNLFTCNELVAHEGNAWLYNPNLSVLRQKVQLPVGSCELAIPMRGKAELVYAGNLHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLQAAGWKVRIIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNASLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNFDIFQEFASDVAHERWWRVHDAMPEVLQQFCLLKSKQKAQLEWDRRQAEKANYTDGHWRIKVKDWRLKKCVDNLCNWKSMLRHWGETNWTDVESYYNPTPPAIATTKKNKASLSGL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0511 646 CDD GT8_Glycogenin 308 553 - -
Lele23g0511 646 FunFam Hexosyltransferase 305 557 - -
Lele23g0511 646 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Lele23g0511 646 PANTHER GLYCOGENIN SUBFAMILY MEMBER 213 600 - -
Lele23g0511 646 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
Lele23g0511 646 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0511 Lele-ChrLele23 3751133 3754820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0511 11 645 Glycosyltransferase AT3G18660 64.472 0.0 862
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1501 21 23295854 23304263 Lele23g0511 23 3751133 3754820 hybridization
Lele22g1489 22 20647035 20651276 Lele23g0511 23 3751133 3754820 hybridization