Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1489 ATGGGTCATTTCACACATGGCGTTGAAGCTAGACACCGTTTACCAACTGCCATTGAAGAGTTGAAACGAAGATTGCCAAGAAGTAAGACGAAAGATGTGGAGAGGCCTTTCCCTTTAACAAGCCAAGAAAAGAGCTCAAGATGCAAACTTTCTTTTCTAAAACTCATTCTATTACTGACCATTTCTGGCACTTATGTAACTCTTCTCTACGCTCCAGAGGTTTATAACACTAACCACTTATCAAGCTCAGGTTCTGGGTGGATTTGGGGCAGCTTAGATACTCGATATATATCGGATGAGGACATTGATTGGAATGATATATTGGCAGTGACAAGGAAGTTGAGTGGGGAAAATGAACTGCAAGGGGTTGGTCTTCTGAATTTCAACAATTTTGAAGTAGAGAAATGGGAGAAACTTATGCCTGAAGCTAAGAACATAGTTTTGCATCTTGAGTATGCAGCAAGAAATGTCACGTGGGAATCTCTATACCCTGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCAGTTTGTCCCTCTCTACCGAGTCTTAGGTCTCCCGGAACAAGACTTAATCTGATAGCGGTGAAGCTCCCTTGTCGCCGGGGGGTGAAAAATTCAAATTGGTCTAGAGATGTTGCTAGGCTTCACCTGCAGCTTGCTGCAGCTGGGCTTGCAGCATCTTTTAGAGGCAATTACACTGTACACGTGCTCTTCATTACCAATTGCTTTCCAATACCAAATCTCTTTACCTGCAATGAACTTGTTGCACATCAAGGGAATGCATGGCTTTACAAGCCAAACTTGAGTGTCTTGAGACAAAAATTTCAGCTCCCAATAGGATCTTGTGAACTTGCAATTCCCATGAGGGGTAAAGAGCTGGTGTATGCTGGGAATGTACACAGAGAAGCCTATGCAACAATTCTTCATTCAGCTCATGTTTATGTTTGTGGAGCCATAGCTGCTGCACAAAGCATTCGCTTGTCTGGATCGACCAGAGACCTTGTGATACTTGTTGATGAGACCATAAGTGGATATCACAGAAGTGGTTTAGAAGCAGCAGGATGGAAAGTAAGAATAATTCAGAGAATCAGAAACCCGAAAGCAGAGAAAGATGCATACAATGAATGGAACTACAGCAAATTCAGATTATGGCAACTCACAGATTATGACAAGATCATATTCATTGATGCAGATTTGCTCATACTAAGAAACATAGATTTTCTGTTTGGAATGCCACAAATCACAGCAACAGGAAACAATGCATCACTTTTTAACTCAGGTGTTATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTTCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGAGATCAAGGATATTTGAATGAGATATTCACATGGTGGCATAGAATTCCAAGGCACATGAACTTTCTGAAGCATTTCTGGGTTGGTGATGAAGAAGAGAAGAAACAAATGAAGACAATGCTGTTTGGAGCGGACCCTCCAATTCTCTATGTTCTTCACTATCTTGGAATGAAGCCATGGCTGTGCTTTAGGGACTATGATTGCAACTGGAACTTCGATATCTTTCACGAGTTTGCGAGCGATGTTGCTCATGAAAGATGGTGGAGAGTTCATGACGCCATGCCTGAGGTGTTGCAGCAGTTTTGTCTGTTGAAATCAAAGCAAAAGGCACAGTTAGAGTGGGATAGAAGGCAAGCTGAGAAAGCAAATTATACAGATGGACATTGGAGAACTAAGGTGAAAGATTGGAGATTGAAGAAGTGTGTTGATAATTTGTGTAACTGGAAGAGCATGTTGAGGCATTGGGGAGAGACGAATTGGACCCATGTTGAGGCTTATTATAATCTAACACCGCCTGCAATTGCTACTGCCAAAACCAAAGCTTCCCTTTCTGGTCTGTGA 1923 0.4191 MGHFTHGVEARHRLPTAIEELKRRLPRSKTKDVERPFPLTSQEKSSRCKLSFLKLILLLTISGTYVTLLYAPEVYNTNHLSSSGSGWIWGSLDTRYISDEDIDWNDILAVTRKLSGENELQGVGLLNFNNFEVEKWEKLMPEAKNIVLHLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGTRLNLIAVKLPCRRGVKNSNWSRDVARLHLQLAAAGLAASFRGNYTVHVLFITNCFPIPNLFTCNELVAHQGNAWLYKPNLSVLRQKFQLPIGSCELAIPMRGKELVYAGNVHREAYATILHSAHVYVCGAIAAAQSIRLSGSTRDLVILVDETISGYHRSGLEAAGWKVRIIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPQITATGNNASLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGADPPILYVLHYLGMKPWLCFRDYDCNWNFDIFHEFASDVAHERWWRVHDAMPEVLQQFCLLKSKQKAQLEWDRRQAEKANYTDGHWRTKVKDWRLKKCVDNLCNWKSMLRHWGETNWTHVEAYYNLTPPAIATAKTKASLSGL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1489 640 Pfam Glycosyl transferase family 8 309 515 IPR002495 GO:0016757
Lele22g1489 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 300 550 IPR029044 -
Lele22g1489 640 CDD GT8_Glycogenin 303 548 - -
Lele22g1489 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 209 595 - -
Lele22g1489 640 FunFam Hexosyltransferase 300 552 - -
Lele22g1489 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 548 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1489 Lele-ChrLele22 20647035 20651276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1489 7 639 Glycosyltransferase AT3G18660 64.055 0.0 852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1489 22 20647035 20651276 Lele23g0511 23 3751133 3754820 hybridization
Lele22g1489 22 20647035 20651276 Lele24g1441 24 20356829 20360623 hybridization