Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0228 ATGCAGTCATTAAGCGTTCCGAGTTTATTGGATTTGCGGGTTCTGTGTCCCGGAAGCTCGGGTTTCGGAGAATCACAGGCGGTGTTGAGGGTGCAGTGGGTGGATTCCAGAAGAACCATCAGGAGAAGAAATATGATCGCCATAGCGTGTGCTGCTGCAGAAAGGGATGGGAATGGCCCCAGAGAGAGTCGGAGAACGAGTCAGAGTCAGAGTCAGAGTCAGAAGCAGAAGAAGAGTCAAATTCCGACGAGCTCGATTCCCTCTTTGTCCCACTCCTACGCCCTCTTGAAGCAGCAATTGGAAGTAGCTGCGAGATCCGAGGATTACAAAGAAGCGGGAAGGATTCGAGACTCGCTAAAATTATTCGAGGAGGAGGAACCAGTTCTGCATCTGCGAAGATTGATGAAGAAAGCGATTGCTGATGAAAGGTTTGAGGATGCAGCTAGATACCGTGATGAGCTAAAAGATATTGCCCCCCACTCTCTATTAAAATGTTCCAGTGATGCCACAACCTTGGGAATAAGGGTTCAAGTTAGGAGTGCTTATATAGAGGGCAGAAGTCAACCTTTGAAAGGGATGTACTTCTTTGCCTACAGAATAAGAATTACCAATAATTCAGACCGCCCCATTCAACTTTTTAGAAGGCATTGGATTATAATTGATGCTAATGGGAAGACAGAAAACGTGTGGGGGATCGGGGATGTTGGTGAACAGCCAGTTATACTTCCTAGGACTAGTTTTGAGTACTCTTCAGGATACCCATTAAACACCCCGAGTGGTAGAATGGAAGGTGACTTTGAGATGATCTACGTGGATAGAATAGGCTCATCCCCATCATTTAATGTGGCAATCGCTCCCTTTTCACTCTCTCTTCTCGGAGATGATGACGGTGTTACCATTTGA 903 0.464 MQSLSVPSLLDLRVLCPGSSGFGESQAVLRVQWVDSRRTIRRRNMIAIACAAAERDGNGPRESRRTSQSQSQSQKQKKSQIPTSSIPSLSHSYALLKQQLEVAARSEDYKEAGRIRDSLKLFEEEEPVLHLRRLMKKAIADERFEDAARYRDELKDIAPHSLLKCSSDATTLGIRVQVRSAYIEGRSQPLKGMYFFAYRIRITNNSDRPIQLFRRHWIIIDANGKTENVWGIGDVGEQPVILPRTSFEYSSGYPLNTPSGRMEGDFEMIYVDRIGSSPSFNVAIAPFSLSLLGDDDGVTI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0228 300 Gene3D ApaG domain 164 294 IPR036767 -
Lele23g0228 300 MobiDBLite consensus disorder prediction 63 86 - -
Lele23g0228 300 ProSiteProfiles ApaG domain profile. 168 296 IPR007474 -
Lele23g0228 300 ProSiteProfiles UVR domain profile. 125 160 IPR001943 GO:0005515
Lele23g0228 300 Pfam UvrB/uvrC motif 130 156 IPR001943 GO:0005515
Lele23g0228 300 Pfam ApaG domain 186 269 IPR007474 -
Lele23g0228 300 MobiDBLite consensus disorder prediction 51 86 - -
Lele23g0228 300 PANTHER OS05G0170800 PROTEIN 36 296 - -
Lele23g0228 300 SUPERFAMILY ApaG-like 170 290 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0228 Lele-ChrLele23 1565236 1567105 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1061 17 21152506 21155195 Lele23g0228 23 1565236 1567105 CCT
Lele18g0478 18 2802040 2811276 Lele23g0228 23 1565236 1567105 CCT
Lele19g0498 19 2847599 2852430 Lele23g0228 23 1565236 1567105 CCT
Lele20g0958 20 15684432 15688476 Lele23g0228 23 1565236 1567105 CCT
Lele23g0228 23 1565236 1567105 Lele23g0228 23 1565236 1567105 ECH
Lele21g1779 21 25479747 25483292 Lele23g0228 23 1565236 1567105 hybridization
Lele22g1754 22 22819690 22820437 Lele23g0228 23 1565236 1567105 hybridization