Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1779 ATGGAAAATGTATCATATCCGTTTCCCATCAAAGTTTTATGCCTCATGATGATCTCAATGTTAGCCTTTTCAATCATTAAGCGTTCCGAGTTTCTTGGATTTGCGGGTTCTGGGTCACGGAAGCTCGGGTTTCGGAGAATCACAGGCGGTGTTGAGGGTGCAGGGGGTGGATTCCAGAAGAACCATCAGGAGAAGAAATATGATCGCCATAGCGAGTGCTGCTGCAGAAAGGGATGGGAATGGCCCCAGAACGAGTCAGAGTCAGAGTCAGAAGCAGAAGAAGAGTCAAATTCCGACGAGGTCGATTCCCTCTTTGTCCCACTCCTACGCCCTCTTGAAGCAGTAATTGGAAGTAGCTGCGAGATCCGAGATTCTAAGAATCTTTATTCTCAAGGTGTGGCGATCGATGCAGCTAGATACCGTGATGAGCTAAAAGACATAGCCCCCCACTCTCTATTAAAATGTTCCAGTGATGCCACCACCTTGATCCATGAAGCTCCTTTTCTTCAATTGATTTCTCTTGGATTTATTCAGGGAATAAGGGTTCAAGTTAGGAGTGCTTATATAGAGGGAAGAAAAAACGTGTGGGGGATCAGGGATGTTGGTGAACAGCCAGTTATACTTCCTAGGACTAGTTTTGAGTACTCTTCAGGATACCCATTAAACACCCCGAGTGGTAGAATGGTAAGACAGCTTCTTTACTGTTCTTTTGATCGGTTGACACTATTGATTAATAAGAGTAAATTTAGCTTTAGTGCCCTTATGCTATTGTTGGTGGAAGGTGGCTCATCCCCCTCATTTAATGTGGCAATTGCTCCCTTTTCACTCTCTCTTCTCGGAGATGATGACGGTGTTACCATTTGA 864 0.4479 MENVSYPFPIKVLCLMMISMLAFSIIKRSEFLGFAGSGSRKLGFRRITGGVEGAGGGFQKNHQEKKYDRHSECCCRKGWEWPQNESESESEAEEESNSDEVDSLFVPLLRPLEAVIGSSCEIRDSKNLYSQGVAIDAARYRDELKDIAPHSLLKCSSDATTLIHEAPFLQLISLGFIQGIRVQVRSAYIEGRKNVWGIRDVGEQPVILPRTSFEYSSGYPLNTPSGRMVRQLLYCSFDRLTLLINKSKFSFSALMLLLVEGGSSPSFNVAIAPFSLSLLGDDDGVTI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1779 287 Gene3D ApaG domain 190 281 IPR036767 -
Lele21g1779 287 ProSiteProfiles ApaG domain profile. 137 283 IPR007474 -
Lele21g1779 287 PANTHER OS05G0170800 PROTEIN 193 283 - -
Lele21g1779 287 SUPERFAMILY ApaG-like 179 241 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1779 Lele-ChrLele21 25479747 25483292 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1061 17 21152506 21155195 Lele21g1779 21 25479747 25483292 CCT
Lele18g0478 18 2802040 2811276 Lele21g1779 21 25479747 25483292 CCT
Lele19g0498 19 2847599 2852430 Lele21g1779 21 25479747 25483292 CCT
Lele20g0958 20 15684432 15688476 Lele21g1779 21 25479747 25483292 CCT
Lele21g1779 21 25479747 25483292 Lele21g1779 21 25479747 25483292 ECH
Lele21g1779 21 25479747 25483292 Lele23g0228 23 1565236 1567105 hybridization
Lele21g1779 21 25479747 25483292 Lele24g1717 24 22467973 22469126 hybridization