Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0124 ATGGAATCGCCGGGAGAGTGGTTGGAGAAGGCCTTGTTTGATCTCTGCCAAAAGATTGAAACTGGTTTGGGATTGGGCCTCGATAAAGAGATAATTTCAGGCCTTGTTTCTTACTGCGACCTTGCTGATCCTCGTGATGCCAAAGAGTACCTTGATAATATAATCGGCCAAGAAGCAGGTAAAACTGTGATTGAAGAATACTTGCGACGGAGAGCTCAGTCAGAATTTAGCAACAAGTCAGATGCTCCTACCTCTAAGTTACATACCTATGTCAAACCACCTTCAGTTGAAGCATCTGCTAGTGGAACTAAAAAATCATTGAGAACACCAAAAGCAGGGACAGTCTCCAGCCATCAGGTGGAACCCAAACAAAATTTGGTTGCCAAAAATCAGGAAAATCAAATTCCTAGTCTAGGAAGTGAATCAAAAACATCAAATAAAGGAAATCAAGTAAATTCTAAAAAGAAGAAGGTCGGGAAAGTTGTTTCACTTGCTGAAGCTGCAAAAGGGTCAATTGTATTTCAGCAGGGAAGACCATGCTCATGTCAAGCACGACGACACAGACTAATCAGCAATTGCTTATCTTGTGGCAAAATAGTTTGTGAACAGGAAGGAGAGGGACCTTGCAATTTCTGTGGTTCTCTTGTGTTGGAAGAGGGGAGCATATATGCTGGTCTGGAAGAAGGTTTGACTCCCTTGTCAGAAGCAGAAGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTTGATTATGACCGAAACTCTGCAGCTCGAACAACAGTTTTTGATGACCAAAGTGACTACTATGAGATTGATGGAAACAATTGGTTATCGAAGGAGGAAAAAGAACTTTTGAAGAAGAAACAAGAGGAGATGGAAGATGCAGAGCGAGCCAAACGGAGTAAAGTTGTTGTGACTTTTGATCTAGTTGGCCGCAAGGTGCTTCTGAATGAAGATGAAGTTTCAGGATTACAGTCTGAAAATAGAATAATGCGTCCGCCGGATGAAAGGGAAGTGAACCGGATCAAGCCAAATCCAAATCTTAAGATTCAACCAATATTTATGGACCCGGGCTTAAGTAACAAATCTGGGAAAGACAGACTACCAAAGAAAGGGCTGAGCAAGGGTTTGTGCCAGGAGATCACAGGGAGGGTGCAGCATGAGCGCAATGACTTGAAATATTTTATGATGTAA 1191 0.4249 MESPGEWLEKALFDLCQKIETGLGLGLDKEIISGLVSYCDLADPRDAKEYLDNIIGQEAGKTVIEEYLRRRAQSEFSNKSDAPTSKLHTYVKPPSVEASASGTKKSLRTPKAGTVSSHQVEPKQNLVAKNQENQIPSLGSESKTSNKGNQVNSKKKKVGKVVSLAEAAKGSIVFQQGRPCSCQARRHRLISNCLSCGKIVCEQEGEGPCNFCGSLVLEEGSIYAGLEEGLTPLSEAEAAAEAYAKRLVDYDRNSAARTTVFDDQSDYYEIDGNNWLSKEEKELLKKKQEEMEDAERAKRSKVVVTFDLVGRKVLLNEDEVSGLQSENRIMRPPDEREVNRIKPNPNLKIQPIFMDPGLSNKSGKDRLPKKGLSKGLCQEITGRVQHERNDLKYFMM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0124 396 Coils Coil 277 300 - -
Lele23g0124 396 Pfam Putative zinc finger motif, C2HC5-type 178 218 IPR009349 GO:0005634|GO:0006355|GO:0008270
Lele23g0124 396 MobiDBLite consensus disorder prediction 74 155 - -
Lele23g0124 396 Coils Coil 233 253 - -
Lele23g0124 396 MobiDBLite consensus disorder prediction 99 152 - -
Lele23g0124 396 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 7 393 IPR039128 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0124 Lele-ChrLele23 802307 805066 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0124 23 802307 805066 Lele23g0124 23 802307 805066 ECH
Lele21g1890 21 26226837 26229592 Lele23g0124 23 802307 805066 hybridization
Lele22g1860 22 23525446 23528244 Lele23g0124 23 802307 805066 hybridization