Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1890 ATGGAATCGCCGGGAGAGTGGTTGGAGAAGGCCTTGTTTGATCTATGCCAAAAGATTGAAACTGCCATAGTTGAAATCCATAATATAATCGGCCAAGAAGCAGGTAAAACTGTGATTGCAGAATGCTTGCGACGGAGAGCTCAGTCAGAATTTAGCAACAAGTCAGATGCCCCTACCACTAAGTTACATACCTATATCAAACCACCTTCAATTGAAGCATCTGCTAGTGGAACTAAAAAATCATTGAGAACACCAAAAGCAGGGACAGTCTCCAGCCATCAGAAGAAAGCCGGGAAAGTTGTTTCACTTGCTGAAGCTGCAAAAGGGTCAATTGTATTTCAGCAGGGAAGACCATGCTCATGTCAAGCACGACAACACAGACTAATCAGCAATTGCTTATCTTGTGGCAAAATAGTTTGTGAACAGGAAGGAGAGGGACCTTGCAATTTCTGTAGTTCTCTTGTGTTGAAAGAGGGGAGCTTATATGCTTGTATGGAAGAAGGTTTGGCTCCCTTGTCAGAAGCAGAAGCGGCTGCTGAAGCTTATGCAAAGAGGATTGTTGATTATGACCGAAACTCTGCAGCTCGAACAACAGTTTTTGATGACCAAAGTGACTACTATGAGATTGATGGAAACAATTGGTTATCGAAGGAGGAAAAAGAACTTTTGAAGAAGAAACAAGAGGAGATGGAAGATGCAGAGCGAGCCAAACGGAGTAAAGTTGTGCTTCTGAATGAAGATGAAGTTTCAGGATTACAGTCTGAAAATAGAATAATGCGTCCGCCGGATGAAAGGGAAGTGAACCGGATCAAGCCAAACCCAAATCTCAAGATTCAACCAATATTTATGGACCCGGGCTTAAGTGACGAGTCTGGGAAAGACAGACTACCAAAGAAAGGGCTGAGAAAGGGTTTGTGCCAGGAGATCACAGGAAGGGTGCAGCATGAGCGCAATGACTTGAAATATTTTATGATGTAA 978 0.4315 MESPGEWLEKALFDLCQKIETAIVEIHNIIGQEAGKTVIAECLRRRAQSEFSNKSDAPTTKLHTYIKPPSIEASASGTKKSLRTPKAGTVSSHQKKAGKVVSLAEAAKGSIVFQQGRPCSCQARQHRLISNCLSCGKIVCEQEGEGPCNFCSSLVLKEGSLYACMEEGLAPLSEAEAAAEAYAKRIVDYDRNSAARTTVFDDQSDYYEIDGNNWLSKEEKELLKKKQEEMEDAERAKRSKVVLLNEDEVSGLQSENRIMRPPDEREVNRIKPNPNLKIQPIFMDPGLSDESGKDRLPKKGLRKGLCQEITGRVQHERNDLKYFMM 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1890 325 Coils Coil 216 239 - -
Lele21g1890 325 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 26 319 IPR039128 -
Lele21g1890 325 MobiDBLite consensus disorder prediction 72 91 - -
Lele21g1890 325 Coils Coil 172 192 - -
Lele21g1890 325 MobiDBLite consensus disorder prediction 276 298 - -
Lele21g1890 325 MobiDBLite consensus disorder prediction 74 91 - -
Lele21g1890 325 Pfam Putative zinc finger motif, C2HC5-type 117 157 IPR009349 GO:0005634|GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1890 Lele-ChrLele21 26226837 26229592 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1890 21 26226837 26229592 Lele21g1890 21 26226837 26229592 ECH
Lele21g1890 21 26226837 26229592 Lele23g0124 23 802307 805066 hybridization
Lele21g1890 21 26226837 26229592 Lele24g1808 24 23142024 23144700 hybridization