Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1860 ATGGAATCGCCAGGAGAGTGGTTGGAGAACGCCTTGTTTGATCTATGCCAAAGGATTGAAACGGGTTTGGGCTTAGGCCTCGATAAAGATATTATTTCTGGCCTTGTCTCTTACTGCAACCTTGCTGATCCTCGTGATGCCAAAGAGTACCTTGATAATATAATCGGCCAAGAAGCAGGCAAAACTGTGATTGAAGAATACTTGCGACGGAGAGCTCAGTCAGAATTTAGCAAGAAGTCCGATGCTCCTACCTCTAAGTTACATGCCTATGTCAAACCACCTTCAGTTGAAGCATCTGCTAGTGGAACTAAAAAATCATTGAGAACACCAAAAGGAGTGACAGTCTCCAGCCACCAGGTGGAACCCAAACAAAATTTGGTTGCCAAAAATCAGGAAAATCAGATTCCAAGTCTAGGAAGTGAATCAAAAACATCAAATAAAGGAAATCAAGTGAATTCTAAAAAGAAGAAGGCCGGGAAAGTTGTTTCACTTGCTGAGGCTGCAAAAGGGTCAATTGTATTTCAGCAGGGAAGACCATGCTCATGTCAAGCACGGCGACACAAACTAATCAGCAATTGCTTATCTTGTGGAAAAATAGTTTGTGAACAGGAAGGAGAGGGACCTTGCCATTTCTGTGGTTCTCTTGTGTTGAAAGAAGGGAGCACATATGCTGGTCTGGAAGAAGGTTTGACCCCCTTGTCAGAAGCAGAAGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTTGATTATGATCGAAACTCTGCAGCTCGAACAACAGTTTTTGATGACCAAAGTGACTACTATGACATTGATGGAAACAGTTGGTTATCGAAGGAGGAAAAAGAACTTTTAAAGAAGAAACAGGAGGAGATGGAGGATGCAGAACGAGCCAAACGGAGTAAAGTTGTTGTGACTTTTGATCTAGTCGGCCGCAAGGTGCTTCTGAATGAAGATGAAGTTTCAGGATTACAGTCTGGAAATAGAATAATGCGTCTGCCGGATGAAAGGGAAGTGAACCGGATCAAGCCAAACCCAAATCTCAAGATTCAACCAATTTTTATGGAGCCGGGCTTAAGTAACAAGTCTGGGAAAGACAGACAACCAAAGAAAGGGCTGAGCAAGGGTTTATGCCTGGAGATCACAGGGAGGGTGCAGCATGAGCGCAATGACTTGAAGTATTTTATTATGGAAGACAAATTGGCAACAGATTCAAATGGCAACTCTTGGCAAGTTCCTTAA 1239 0.4318 MESPGEWLENALFDLCQRIETGLGLGLDKDIISGLVSYCNLADPRDAKEYLDNIIGQEAGKTVIEEYLRRRAQSEFSKKSDAPTSKLHAYVKPPSVEASASGTKKSLRTPKGVTVSSHQVEPKQNLVAKNQENQIPSLGSESKTSNKGNQVNSKKKKAGKVVSLAEAAKGSIVFQQGRPCSCQARRHKLISNCLSCGKIVCEQEGEGPCHFCGSLVLKEGSTYAGLEEGLTPLSEAEAAAEAYAKRLVDYDRNSAARTTVFDDQSDYYDIDGNSWLSKEEKELLKKKQEEMEDAERAKRSKVVVTFDLVGRKVLLNEDEVSGLQSGNRIMRLPDEREVNRIKPNPNLKIQPIFMEPGLSNKSGKDRQPKKGLSKGLCLEITGRVQHERNDLKYFIMEDKLATDSNGNSWQVP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1860 412 Coils Coil 277 300 - -
Lele22g1860 412 MobiDBLite consensus disorder prediction 74 158 - -
Lele22g1860 412 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 7 404 IPR039128 -
Lele22g1860 412 Pfam Putative zinc finger motif, C2HC5-type 178 219 IPR009349 GO:0005634|GO:0006355|GO:0008270
Lele22g1860 412 Coils Coil 233 253 - -
Lele22g1860 412 MobiDBLite consensus disorder prediction 99 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1860 Lele-ChrLele22 23525446 23528244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1860 22 23525446 23528244 Lele22g1860 22 23525446 23528244 ECH
Lele22g1860 22 23525446 23528244 Lele23g0124 23 802307 805066 hybridization
Lele22g1860 22 23525446 23528244 Lele24g1808 24 23142024 23144700 hybridization