Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1766 ATGGCTTCCCAATCGGATGCTCTTCCAAATGCTTCGGATGATAAACTTCGAAACCCAGGTCCTGGAACTATTCAACCAAATGTTGATGATCCCCAAGAAGAGCCTGTAAAACAGGATTCAACATCAGTATTTGTGAACTCACAACCTACGCGGGAAGAGCAAGTACAAAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGCTCTCCTGTCATATACAGGAGATCATTTCTGGAGAAGAAGGGCCTCACAAAGGAGGAGATAGATGAAGCCTTTCGCCGTGTGCCGGATTCACCTCCAAATGTGATAATATCTGGTGAAAATAAAGATGGGCAGCTGAAGACATCATCAAACGTTCAGCAACAAACTGTGGCACAGACTTTGCAGCAGGGTGCATCTACTTCTACTGTTACCACCATTTCATATCGCAGATTTCATTGGTCCCAAGCCATAATAGCAATTGGATTTCTTGCTGCTTCAGGTGCTGGAACAGCTTTACTAATAAAGAATACAATTATTCCTCGATTAAAATCATGGATACTAAAGGTTGTACTAGAAGATGATGAAACATCGAAGAAAATAGTCTCAAAACCGTCATTGGCTGAAGAAACAGCACTAGCTGCTAAAGCTGCTGCTGCCGCAACTGAAGATGTGGCAAAAGCAAGCCAGGAAATGCTGATTTTACATAGTGAAGAGAAGAGATTCTTTGGAGAACTTGTGAGCCTTGTAGATAAGCAAGTACAAGAGATGAAGTCGATGACTAATGCAATAAGAAAATTGGAAGCTTCTAGTGGAGCCACTCTTTTGGAGAAAGAAGACCTTGGAGTCACTCAAGCAAGTTCAAAGCAACTGGTTGCGAATGGCAAGTTGGACTATAACATGCATTCAGGGAGCTACTCGTCAACACCTGCTTCTGCTGGACCATCTACTGCTCCTTATTCTAAGTCATATATGGAGATAATGGCCATGGTCGAGAGAGGGGAGAAGCCTTCTAACGTTAGAGATATTGATGATCGTCCCCCCAATCCAAATCAACAACCATCAAATCCTCGCATGGCACCTAGAACCAAGCCTTGGGAGGTTAGTCAGGTGCAAAGCACCCATACCCAAATGCTTCAATCTCGGGTCATTGGCAAAGACTTGAGTTCCAAGTCTCAAGATGCCTCCATTGAAGTTAATGGAGACACTTCAGTTCCCTGGTGGCAAAGGAAAAATGTTAGAATCAGTGAGATCGATAATGGCAATGAACATGATACAGCACCTTACAGTGCTCCATCTAGTCAGCCGCAGCCAGTGAAACGCCCATGGGTTCCTCCTCAGCCACCTCCTATAGCCATGCCAGAGGCTGCTGAAGCCATTAGACGGCCCAAGTCAGTGGCTCAGAAGGAACAGGTGCAAGATGATCAGTCATCAGCCCATTCTTCTGACACGTCTGGTGAGGTGCAAAACGTCCTAAAAACAGCTGAACCTGAAGGCGCTACAGATGATAGTGGACACAGCTCAATGCCCAACTCTGGTGAGATACAAACAGTTCAGGAAGTCAATTAG 1551 0.4475 MASQSDALPNASDDKLRNPGPGTIQPNVDDPQEEPVKQDSTSVFVNSQPTREEQVQNAVKFLSHPKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSPPNVIISGENKDGQLKTSSNVQQQTVAQTLQQGASTSTVTTISYRRFHWSQAIIAIGFLAASGAGTALLIKNTIIPRLKSWILKVVLEDDETSKKIVSKPSLAEETALAAKAAAAATEDVAKASQEMLILHSEEKRFFGELVSLVDKQVQEMKSMTNAIRKLEASSGATLLEKEDLGVTQASSKQLVANGKLDYNMHSGSYSSTPASAGPSTAPYSKSYMEIMAMVERGEKPSNVRDIDDRPPNPNQQPSNPRMAPRTKPWEVSQVQSTHTQMLQSRVIGKDLSSKSQDASIEVNGDTSVPWWQRKNVRISEIDNGNEHDTAPYSAPSSQPQPVKRPWVPPQPPPIAMPEAAEAIRRPKSVAQKEQVQDDQSSAHSSDTSGEVQNVLKTAEPEGATDDSGHSSMPNSGEIQTVQEVN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1766 516 Pfam Family of unknown function (DUF5572) 313 362 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 432 447 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 332 369 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 498 516 - -
Lele22g1766 516 FunFam Peroxisomal membrane protein PEX14 43 104 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 411 516 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 37 51 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 1 51 - -
Lele22g1766 516 Gene3D - 43 106 IPR036388 -
Lele22g1766 516 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 512 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lele22g1766 516 Pfam Pex14 N-terminal domain 50 95 IPR006785 -
Lele22g1766 516 Coils Coil 244 264 - -
Lele22g1766 516 MobiDBLite consensus disorder prediction 464 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1766 Lele-ChrLele22 22896866 22902222 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1766 22 22896866 22902222 Lele22g1766 22 22896866 22902222 ECH
Lele22g1766 22 22896866 22902222 Lele23g0218 23 1478167 1485341 hybridization
Lele22g1766 22 22896866 22902222 Lele24g1727 24 22546442 22551824 hybridization