Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1727 ATGGCTGCCCAATCCGCTGCTCCTCCAAATGCTTCGGATGATAAACTTCGAAACCCTGGTCCTGGAACTATTCAACCAAATGTTGATCATCCCCAAGAAGAGCCTGTAAAACAGGATTCAACATCAGTATTTGTGAACTCACAACCCATGCGGGAAGAGCAAGTACAAAATGCTGTGAAATTTCTATCACACGCAAAAGTTAGAGGCTCTCCTGTCATATACAGGAGATCATTTCTGGAGAAGAAGGGCCTCACAAAGGAGGAGATAGATGAAGCCTTTCGCCGCGTGCCGGATTCACCTCCAAATGTGATAACATCTGGTGAAAATAAAGATGGGCAGCTGAAGACACCATCAAACGTTCAGCAACCAACTGTGGCGCAGAATTTGCAGCAGGGTGCATCTACTTCTACTGTTACCCCCATTTCATATCGCAGATTTCATTGGTCCCAAGCCATAATAGCAATTGGATTTCTTGCTGCTTCAGGTGCTGGAACAGCTTTACTAATAAAGAATACAATTATTCCTCGATTAAAATCATGGATACGCAAGGTTGTACTAGAAGATGATGAAACATTGAAGAAAATAGTCTCAAAACCGTCATTGGCTGAAGAAACAGCACTAGCTGCTAAAGCTGCTGCTGCTGCAACTGAAGATGTGGCAAAAGCAAGCCAGGAAATGCTGATTTTACATAGTGAAGAGAAGAGATTCTTTGGAGAACTTGTGAGCCTTGTAGATATGCAAGTACAAGAGATGAAGTCGATGACTAATGCAATAAGAAAATTGGAAGCTTCTAGTGGAGCCACTCTTTTGGAGCAAGAAGACCACGGAGTCACTCGAGCAAGTTCAAAGCAACTGATTGCGAATGGCAAGTTGGACTATAACATGCATTCAGGAAGCTACTCGTCAACACCTGCTTCTGCTGGACCATCTACTGCTCCTCATCCTAAGTCATATATGGAGATAATGGCCATGGTCCAGAGAGGGGAGAAGCCTTCTAACATTAGAGATATTGATGATCGTCCCCCCAATCCAAATCAAGAACCATCAAATCCTCGCATGGCACCTAGAACCAAGCCTTGGGAGGTTAGTCAGGTGCAAAGCACCCATACCCAAATGCTTCAATCTCGGGTCAATGGCAAAGACTTGAGTTCCAAGTCTCAAGATGCCTCCATTGAAGTGAATGGAGACACTTCAGTTCCCTGGTGGCAAAGGAAAAATGTTAGAATCAGTGAGATCGATAATGGCAATGAACATGATACAGCACCTTACAGTGCTCCATCTAGTCAGCTGCAGCCAGTAAAACGCGTATGGGTTCCTCCTCAGCCGCCTCCTATAGCAATGCCAGAGGCTGCTGAAGCCATTAGACGGCCCAAGTCGGTGGCCCAGAAGGAACAGGTGCAAGATGATCAGTCATCAGCTCATTCTTCTGACACGTCTGGTGAGGTGCAAAACATCCCAAAAACAGCTGAACCTGAAGGCGCTACAGATGATAGTGGACTCAGCTCAATGCCCAACTCTGGTGAGATACAAACAGTTCAGGAAGTCAATTAG 1551 0.4533 MAAQSAAPPNASDDKLRNPGPGTIQPNVDHPQEEPVKQDSTSVFVNSQPMREEQVQNAVKFLSHAKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSPPNVITSGENKDGQLKTPSNVQQPTVAQNLQQGASTSTVTPISYRRFHWSQAIIAIGFLAASGAGTALLIKNTIIPRLKSWIRKVVLEDDETLKKIVSKPSLAEETALAAKAAAAATEDVAKASQEMLILHSEEKRFFGELVSLVDMQVQEMKSMTNAIRKLEASSGATLLEQEDHGVTRASSKQLIANGKLDYNMHSGSYSSTPASAGPSTAPHPKSYMEIMAMVQRGEKPSNIRDIDDRPPNPNQEPSNPRMAPRTKPWEVSQVQSTHTQMLQSRVNGKDLSSKSQDASIEVNGDTSVPWWQRKNVRISEIDNGNEHDTAPYSAPSSQLQPVKRVWVPPQPPPIAMPEAAEAIRRPKSVAQKEQVQDDQSSAHSSDTSGEVQNIPKTAEPEGATDDSGLSSMPNSGEIQTVQEVN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1727 516 Pfam Family of unknown function (DUF5572) 313 362 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 438 516 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 498 516 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 332 359 - -
Lele24g1727 516 Gene3D - 43 105 IPR036388 -
Lele24g1727 516 MobiDBLite consensus disorder prediction 102 118 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 96 118 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 412 431 - -
Lele24g1727 516 FunFam Peroxisomal membrane protein PEX14 43 105 - -
Lele24g1727 516 Pfam Pex14 N-terminal domain 51 95 IPR006785 -
Lele24g1727 516 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 30 511 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lele24g1727 516 MobiDBLite consensus disorder prediction 1 41 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 373 392 - -
Lele24g1727 516 MobiDBLite consensus disorder prediction 464 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1727 Lele-ChrLele24 22546442 22551824 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1727 24 22546442 22551824 Lele24g1727 24 22546442 22551824 ECH
Lele22g1766 22 22896866 22902222 Lele24g1727 24 22546442 22551824 hybridization