Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0218 ATGCGCCGAGAGCCGCTCCATAATCCATTGAATCTTGCAATTCTTACTTTTTTTGGAGCTGTCTCAGTGCCCCGGGCCTCCGATAGCGTTGCATACGATTCCAGCGGAGCAAAACCGAGCATGGCTACACAATCGGCTGCTCCTCCAAATGCTTCGAATGATAAACTCCGAAACCCAGGTCCTGAAACTATTCAACCAAATGTTGATCAGCCCCAAGAAGAGCCCATAAAACAGAATTCAACATCAGTATTTGTGAACTCACAACCTATGCGGGAAGAGCAAGTACAGAATGCTGTGAAATTTCTATCACACACAAAAGTTAGAGGCTCTCCTGTCATATACAGGAGATCATTTCTGGAGAAGAAGGGCCTCACAAAGGAAGAGATAGATGAAGCCTTTCGCCGTGTGCCAGATTCACCTCCAAATGTGATGACATCTGGTGAAAATAAAGATGGGCAGCTCAAGACATCATCAAACGTTCAGCAACAAACTGCGCCACAGACTTTGCAGCAGGGTGCATCTACTTCTACTGGTACCATCATTTCATATCGCAGATTTCACTGGTCCCAAGCCATTATAGCAATTGGATTCCTTGCTGCTTCAGGTGCTGGAACAGCTTTACTAATAAAGAATTCGATGATTCCTCGGTTAAAATCATGGATACGTAAGGTTGTATTAGAAGATGATGAAACATCGAAGAAAATAGTCTCAAAACCGTCGTTAGCAGAAGAAACAGCACTAGCTGCAAAAGCTGCTGCTGCCGCAACTGAAGATGTGGCAAAAGCAAGCCAGGAAATGCTGATTTTACATAGTGAAGAGAAGAGATTCTTTGGAGAACTTATGAGCCATGTAGATAATCAAGTACAAGAGATGAAGTCGATGACTAATGCAATAAGAAAATTTGAAGCTTCTAGTGGGGCCACACTTTTGGAGCAAGAAGACCACAGAGTCTCTCAAGCAAGTTCAAAGCAACTGATTGCGAATGGCAAGTTGGACTATAACATGCATTCAGGGAGCGACTCATCAACACCTGCTTCTGCTGGACCATCTACTGCTCCTCAGCCTAAGTCATATATGGAGATAATGGCCATGGTCCAGAGAGGGGAGAAGCCTTCTAACATTAGAGATATTGATGATCGTCCCCCCAATCCAAATCAACAACCATCAAATCCTCGCATGGCGCCTAGAGCCAAGCCTTGGGAGCTTAGTCAGGTGCAAAGCACCCATACCCAAATGCTTCAATCTCGGGTCAATGGCGAAGACTTGAGTTCCAAGATTCAAGATGCCTCCATTGAAGTGAATAGAGACACTCCAGTTCCCCGGTGGCAAAAGAAAAATGTTAGAATCAGTGAGATGCATAACGGCAATGAGCATGATACAGCACCTTACAGTGCTCCATCTAGTCAGCCGCAGCCATTAAAACGTGCAAGGGTTCCTCCTCAGCCGCCTCCGATGGCAATGCCAGAGGCTGCTGAAGCCATTAGACGGCCCAAGTCGGTGGATCAGAAGGAACAGGTTCAACATGATCAGTCATCAGCCCATTCTTCAGACATGTCTGGTGAGGTGCAAAACGTCCCAAAAACATCTGAATCTGAAAGCGCTACAGATGACAGTGGACTCAGCTTAATGCCCAACTCTGGTGAGATACAAACGGCTCAGGAAGTCAACTAG 1671 0.4578 MRREPLHNPLNLAILTFFGAVSVPRASDSVAYDSSGAKPSMATQSAAPPNASNDKLRNPGPETIQPNVDQPQEEPIKQNSTSVFVNSQPMREEQVQNAVKFLSHTKVRGSPVIYRRSFLEKKGLTKEEIDEAFRRVPDSPPNVMTSGENKDGQLKTSSNVQQQTAPQTLQQGASTSTGTIISYRRFHWSQAIIAIGFLAASGAGTALLIKNSMIPRLKSWIRKVVLEDDETSKKIVSKPSLAEETALAAKAAAAATEDVAKASQEMLILHSEEKRFFGELMSHVDNQVQEMKSMTNAIRKFEASSGATLLEQEDHRVSQASSKQLIANGKLDYNMHSGSDSSTPASAGPSTAPQPKSYMEIMAMVQRGEKPSNIRDIDDRPPNPNQQPSNPRMAPRAKPWELSQVQSTHTQMLQSRVNGEDLSSKIQDASIEVNRDTPVPRWQKKNVRISEMHNGNEHDTAPYSAPSSQPQPLKRARVPPQPPPMAMPEAAEAIRRPKSVDQKEQVQHDQSSAHSSDMSGEVQNVPKTSESESATDDSGLSLMPNSGEIQTAQEVN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0218 556 MobiDBLite consensus disorder prediction 494 510 - -
Lele23g0218 556 Pfam Family of unknown function (DUF5572) 353 401 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 142 174 - -
Lele23g0218 556 Gene3D - 83 145 IPR036388 -
Lele23g0218 556 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 67 544 IPR025655 GO:0005515|GO:0005778|GO:0016560
Lele23g0218 556 MobiDBLite consensus disorder prediction 452 556 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 134 174 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 473 487 - -
Lele23g0218 556 Pfam Pex14 N-terminal domain 91 135 IPR006785 -
Lele23g0218 556 MobiDBLite consensus disorder prediction 372 396 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 332 353 - -
Lele23g0218 556 FunFam Peroxisomal membrane protein PEX14 83 145 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 30 75 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 33 75 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 511 556 - -
Lele23g0218 556 MobiDBLite consensus disorder prediction 332 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0218 Lele-ChrLele23 1478167 1485341 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0218 23 1478167 1485341 Lele23g0218 23 1478167 1485341 ECH
Lele22g1766 22 22896866 22902222 Lele23g0218 23 1478167 1485341 hybridization