Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1672 ATGAAAAGAAAATCAAAAAGAAACTTCGCAAGAGTCACTATATGGGTCGCAACTATTTCAACGACATCGGGGGAGCCAAAACTCAAGTATGCATATCGGACGAACGAGATTCCTCACACTCAACTTCTAGGGTTTCTTTCTTCAATGGCTCTTTACCTTCTCTACGAGTCCGCTTCTGGCTACGGCCTATTCCATGCTCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTCGTGCAGCTTGCGGCATTTTCTCCTTTTCAATCTGCTCTTGATGCTCTTAAGCAATGCAACTCTGTCTCTGAAGGTCTGTTGACTGATGAGCTGAGAAGTTTTCTGGAGATCAATCTCCCAAAAGTTAAGGAAGGCAAGAAGGCAAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGTTCTCAGATCTCTGAAGTGACTAAAATTCCTTGTCAAAGTAATGAGTTTGTGTGTGAGCTGCTTCGAGGTGTTCGGCTCCATTTTGATAGATTTCTCAAGGATCTCAAGCCTGGAGATTTGGAAAAGGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCATGGCATTTTCCAGAAATGGTGAAGATTGTAAATGACAATTATCTATATGCCAGAGTTGCAAAATATATCGAAGATAAGTCAAAGCTGACTGAGGACAAAATCCCAGGCTTAACAGACGTTGTTGGAGATGAAGACAAGGCAAAGGAGATTGTGGAAGCTGCCAAGGCATCTATGGGACAGGATTTATCTCCAGTGGACCTAATTAATGTTCAGCAATTTGCTCAGAGAGTAATGGACCTATCTGAGTATAGGAGGAAACTTTATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGGGCTCGGTTGATTTCACATGCCGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAAATTCTTGGCGCAGAGAAGGCCTTGTTCAGGGCATTGAAAACCAGAGGCAATACACCCAAATACGGTTTGATATTCCATTCATCTTTTATTGGCCGTGCATCTTCCAAAAACAAAGGCCGAATGGCTCGCTATCTTGCAAATAAGTGTTCAATTGCATCACGCATTGACTGCTTTTCTGAAAGGGGCAGTACAGTTTTTGGAGAGAAACTTCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTGGCCCCACGTAAGAACATTGATGTAATGAAGGCTGCTATGGAAAGTGCTGAAAATAAAGATACTGAGATTGCTACAGAAGCGCCTACTGAAGTATCTGGCAAGAAAGGCAAAAAGAAGGCAAAATCTGCTGATGCAAATGGAGTTGAAGAAATGGCTATTGACAAGTCCAATGGAGTTACAAATGGTGATGCATTAGAGGATCACAAATCAGAAAAGAAAAGGAAGAAGAAAGAAAAGAGAAAATTGGACGTGGACACGGAGGTGCAGGATGTGATCGTTCAAGATGATGCTAATAATGGCGAGGCAAATGGAGAAGTGAAGAAGAAGAAGAAAGAGAAGAAAGATAATGATGGAGAAGTACAAGACGGCGCTGTTAAGACCAAGAAGAAGAAGAAGAAATCCAAAACTGAGGATGATGAGTAA 1812 0.4211 MKRKSKRNFARVTIWVATISTTSGEPKLKYAYRTNEIPHTQLLGFLSSMALYLLYESASGYGLFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVVDPKIGSQISEVTKIPCQSNEFVCELLRGVRLHFDRFLKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPEMVKIVNDNYLYARVAKYIEDKSKLTEDKIPGLTDVVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASSKNKGRMARYLANKCSIASRIDCFSERGSTVFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAMESAENKDTEIATEAPTEVSGKKGKKKAKSADANGVEEMAIDKSNGVTNGDALEDHKSEKKRKKKEKRKLDVDTEVQDVIVQDDANNGEANGEVKKKKKEKKDNDGEVQDGAVKTKKKKKKSKTEDDE 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1672 603 MobiDBLite consensus disorder prediction 564 603 - -
Lele22g1672 603 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 51 595 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lele22g1672 603 MobiDBLite consensus disorder prediction 477 603 - -
Lele22g1672 603 MobiDBLite consensus disorder prediction 524 551 - -
Lele22g1672 603 FunFam Nucleolar protein 56 188 346 - -
Lele22g1672 603 Gene3D - 189 346 - -
Lele22g1672 603 Coils Coil 528 548 - -
Lele22g1672 603 MobiDBLite consensus disorder prediction 494 508 - -
Lele22g1672 603 SUPERFAMILY Nop domain 211 460 IPR036070 -
Lele22g1672 603 SMART NOSIC_2 218 270 IPR012976 -
Lele22g1672 603 Pfam NOP5NT (NUC127) domain 52 117 IPR012974 -
Lele22g1672 603 FunFam Nucleolar protein 56 347 459 - -
Lele22g1672 603 ProSiteProfiles Nop domain profile. 343 461 IPR002687 -
Lele22g1672 603 Gene3D Nop domain 347 470 IPR042239 -
Lele22g1672 603 Pfam snoRNA binding domain, fibrillarin 225 457 IPR002687 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1672 Lele-ChrLele22 22213126 22216709 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1672 22 22213126 22216709 Lele22g1672 22 22213126 22216709 ECH
Lele22g1672 22 22213126 22216709 Lele23g0317 23 2217236 2224923 hybridization
Lele22g1672 22 22213126 22216709 Lele24g1636 24 21923909 21927257 hybridization