Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0317 ATGGCTCTTTACCTTCTCTACGAATCCGCTTCTGGCTACGGCCTATTCCATGCCCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGAAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTCGTGCAGCTTGCGGCATTTTCTCCTTTCCAATCTGCCCTTGATGCTCTCAAGCAATGCAACTCTGTTTCTGAAGGTCTGTTGACCGATGAGCTGAGAAGTTTTCTGGAGATTAATCTCCCAAAAGTTAAGGAAGGCAAGAAGGCAAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGTTCTCAGATCTATGAAGTGACTAAAATTCCATGTCAAAGTAATGAGTTTGTGTGTGAGCTACTTCGAGGTGTTCGGCTCCATTTTGATAGATTTCTCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAACTGGTGAAGATTGTAAATGACAACTATCTATATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAAGCTGACTGAGGACAAAATCCCAGGCTTAACAGACATAGTTGGAGATGAAGACAAGGCGAAGGAGATAGTGGAAGCTGCCAAGGCATCTATGGGACAGGATTTGTCTCCAGTGGACCTAATTAATGTTCAGCAGTTTGCTCAGAGGGTAATGGACCTATCTGAGTATAGGAGGAAGCTATATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGTGCTCGGTTGATTTCACATGCCGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATACGGTCTGATATTCCATTCATCTTTTATTGGTCGAGCATCTGCCAAAAACAAAGGCCGAATGGCTCGCTATCTTGCAAATAAGTGTTCAATTGCATCACGCATTGACTGCTTTTCTGAAAGGGGCAGTACAGCTTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTTGCCCCACGTAAGAACATTGATGTCATGAAGGCTGCTATGGAAAGTACTCAAAATAAAGATGATGAGATTGCTACAGAAGCGCCTACTGAAGCATCTGGCAAGAAAGGCAAAAAGAAGGCAAAATCTGCTGATGCAAATGGAGTTGAAGAAATGGCTGTCGATAATATGCCCAACGGAGTTACAAATGGAGATGCATTAGAGGATCACAAATCAGAAAAGAAGAAGAAGAAAGAGAAGAGGAAACTGGACGTGGACACGGAGATGCAGGATGTGACCGTTCAAGATGACGCGAATAATGGCAAGGCAAATGGAGAAGTGAAGAAGAAGAAGAAGAAAGAGAAGAAAGATAATGATGGAGAAGTACAAGACGGTGCTATTAAGACCAAGAAGAAGAAGAAGAAATCCAAAACTGAGGATGATGAAACATCCAAAACCGAGAGGCCAAGGAGGAGGATAACACGCAGAGGAAGCGAAATGGCGAGCGCTAACTTGGAAGATGTTCCTTCTGTGGATCTCATGACTGAGCTTCTCCGTCGAATGAAGTGCGCCTCCAAACCCGACAAGCGTCTGATCTTCATTGGTCCACCTGGATCAGGGAAAGGCACCCAATCACCAGTCATAAAGGATGAGTATTGCTTGTGCCACTTAGCTACTGGTGACATGTTAAGAGCTGCTGTAGCAGCTAAAACTCCTCTTGGCATCAAGGCTAAAGAAGCAATGGACAAGGGAGAACTTGTTTCAGACGATTTGGTTGTTGGAATTATAGATGAGGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCTAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGAAAGGAAAGGAGCAAAACTAGACAAGGTACTCAATTTTGCAATTGATGATGCAATCCTTGAAGAGCGGATTACTGGTCGCTGGATACACCCATCCAGTGGGAGAACCTACCATACAAAATTTGGCCCACCAAAGGTTCCAGGAATTGATGATGTAACTGGGGAACCCCTGATTCAGCGCAAGGATGACACAGCAGCTGTCTTGAAATCTAGACTTGAAGCGTTTCACAGACAAACTGAACCAGTTATTGATTATTATTCAAAGAAAGGTCTTGTTGCTAACCTTCATGCAGAGAAGCTTCCCAAAGAGGTGACAACTGAGATCGAGAAGGTGTTGTCTACATAG 2451 0.4349 MALYLLYESASGYGLFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVVDPKIGSQIYEVTKIPCQSNEFVCELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVAKYIEDKSKLTEDKIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSERGSTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAMESTQNKDDEIATEAPTEASGKKGKKKAKSADANGVEEMAVDNMPNGVTNGDALEDHKSEKKKKKEKRKLDVDTEMQDVTVQDDANNGKANGEVKKKKKKEKKDNDGEVQDGAIKTKKKKKKSKTEDDETSKTERPRRRITRRGSEMASANLEDVPSVDLMTELLRRMKCASKPDKRLIFIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLERKGAKLDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFGPPKVPGIDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGLVANLHAEKLPKEVTTEIEKVLST 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0317 816 FunFam Nucleolar protein 56 299 411 - -
Lele23g0317 816 Pfam Adenylate kinase, active site lid 729 764 IPR007862 GO:0004017
Lele23g0317 816 ProSitePatterns Adenylate kinase signature. 683 694 IPR033690 -
Lele23g0317 816 FunFam Nucleolar protein 56 140 298 - -
Lele23g0317 816 Pfam Adenylate kinase 608 792 - -
Lele23g0317 816 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 543 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lele23g0317 816 CDD ADK 604 806 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 Gene3D - 575 815 IPR027417 -
Lele23g0317 816 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Lele23g0317 816 MobiDBLite consensus disorder prediction 429 577 - -
Lele23g0317 816 PRINTS Adenylate kinase signature 762 777 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 PRINTS Adenylate kinase signature 683 699 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 PRINTS Adenylate kinase signature 606 619 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 PRINTS Adenylate kinase signature 779 793 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 PRINTS Adenylate kinase signature 634 648 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 603 807 IPR027417 -
Lele23g0317 816 MobiDBLite consensus disorder prediction 480 503 - -
Lele23g0317 816 Gene3D - 141 298 - -
Lele23g0317 816 MobiDBLite consensus disorder prediction 516 571 - -
Lele23g0317 816 FunFam Adenylate kinase mitochondrial 603 816 - -
Lele23g0317 816 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Lele23g0317 816 TIGRFAM adk: adenylate kinase 604 814 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele23g0317 816 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Lele23g0317 816 MobiDBLite consensus disorder prediction 429 460 - -
Lele23g0317 816 Hamap Adenylate kinase [adk]. 603 815 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele23g0317 816 SUPERFAMILY Nop domain 163 412 IPR036070 -
Lele23g0317 816 SMART NOSIC_2 170 222 IPR012976 -
Lele23g0317 816 Gene3D Nop domain 299 422 IPR042239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0317 Lele-ChrLele23 2217236 2224923 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0317 23 2217236 2224923 Lele23g0317 23 2217236 2224923 ECH
Lele22g1672 22 22213126 22216709 Lele23g0317 23 2217236 2224923 hybridization