Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1595 ATGTTATCTGGTCTTGCCGCCCACTTTTGTCGAAGTTTCATTCCACTCAAAAATTACAAATGGACAAGAGGATCTTTGATTTTCTTTCCTCTTTCCTTTTCACAGCACCAATCCGTGTCCTACAAATATATCCATCCATCTTTCCTTCAAGATAGAATGCAGCCAAAATCTGCATCAGAATCTAAGAAATTAAGCAGAGAGAAAAAGGGAGCAGACAGCGAGGTGATAGGAACTTCATCAGATCTTCATAATCGTGAATCAGACATAGAACTCATTGGAGGTGAGAGGGTACCTCATAGTGATCCATTAAGTGGACCTTTGAACAAAAGGGTTGGAAGGAAAAGCCTCCAGTTCAGTGTTCCTGAATCCAGCACCGCCATTAATGTTGCTAGAAGCAGTGCTTGCAACAAACCAGAGGATGGAGACGAAGGAGCCTTCGTTGAGGTCACAATGGATATGCAAGGAGATTCTGTTGCTTTACACAGCGTTAAAACAGTTGCAGGTGGGGATGTTCGCGAAGACGAGAAATCTGGTTTGCTTAAAGATCTTGAGAAGAAAACATCACTTGGTGCTTCAATTGTTCGTAATGCTTCTATTAAAGTGAAGCATGTGTCTCAGGAACTGAAGCGTTTGGCTTCATTTTCAAAGTCAGCAGCCCCGGTGAAACACTATGATAGGTCTAAATCTGCAGCTGCTCATGCTCTTAAGAGACTCAAGTTAATCAGTAGAACTGATGGTTGTGCAGGTTGGGATGAGGTTGAGAAGCAATTTGATAAGCTTACTGCTACTACAGATGGTTATCTTCCTCGTGCTCTCTTTGGAAAATGTATAGGAATGAGCAAGAAATCTGAGGCTTTTGCATTGGAGCTGTTTGATGCTCTCTCTCGGAAGAGACGAATTCAGGGGGATTCCATTAACAAGGCACATCTGAAGGATTTGTGGGACCAGATTTCAGACCAAAGCTTCGATTCTAGGCTTAGAATATTCTCTGACATGGTGGATAAAGATGCAGATGGTAGAATCACCGAGGAAGAAATCAAAGAAATTATCTTGCTTAGCGCCACTACCAACAAACTCACGCGTATCCAGAAACAAGCAGAAGAATATGCAGCTTTGATTATGGAAGAACTAGACCCAGCTGAAACAGGATTTATCATGATAGCCTACCTGGAGTTGTTATTGTTGCATGGACCTGAAAATTCTAAAAGAGGACACAGCAAGTACCTGAGCCAAATGCTGAGACAAAAGCTTATGCCTACCTATGACAACAATGTTATTAGAAGACGGTACAGGGACACCTCATACTTCTTCTTACAGGATAATTGTAAGAGAGCTTGGGTGTTGGCACTGTGGACGGGTGTGATGGCAGGTCTATTTGCCTACAAGTACATGCAGTATCGAGAAAGAGACGACGTGTATGAGGTAATGGGCCATTGTGTGTGCATGGCAAAAGGTGCAGCTGAGACACTAAAATTGAACATGGCTCTTATTTTGTTACCTGTTTGCCGAAACACCATCACCTGGATCAGGAGTAAGACCAGGCTAGGTGTTGTGGTTCCTTTTGATGACAACCTCAACTTCCACAAGGTGATAGCTGTGGGAGTAACATTTGGCGTTGGTATACATGCTATTTATCATCTTACTTGTGATTTTCCTCGCCTTCTTGATGCAAGTAATGAAAAGGATTATAATGGTAGTGCTAATGGCAATAGCATTCACCCTGGCCACCCCTTGGTTCAGGCGAGGCAGAGTGAAGCTACCAGACCCCTCGACATGCTCACCGGTTTCAACGCCTTTTGGTATTCCCATCACCTCTTCGTCATTGTGTATGCCATGTTGATAGTGCATGGAGAGAAACTTTACTTGACAAAGAAATGGTACAAGAAAACGACCTGGATGTATTTGGCTATTCCTGTAATCATCTATGTATTGGAAAGGTTGATTAGAGCCCTCAGAGCAAGCATCAAGGGAGTGAGAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCAATTCACATGTCAAAGCCTCCTGGGTTTAGATACAGGAGTGGACAATACATGTTTGTCAACTGTGATGCTGTATCTCCGTTTGAATGGCATCCGTGCTCCATAACCTCGGCCCCTGGGGATGACTACCTTAGTGTTCATATTCGAACAGCAGGTGACTGGACCCGAAGCCTCAAAGCAAAATTATTAGAGGCATGCCGACCTCCCCCGGATGGGAAGAGTGGACTTCTAAGAGCTGAAAGCGTGCTAGGAGATGGCAGTCCAAGCTCTCTTCCTAAAGTTCTGATTGATGGTCCATATGGAGCAGCAGCTCAAGACTATCAGAAGTATGAAGTGGTTTTACTAGTGGGATTAGGAATCAGAGCTATCCCAATGATCAGTATAGTGAAGGACATAGTTAATAACTACAAGGCGATGGAAGAAGAAGAGGAGATGGCGTTAGAGGAAGGAGCAAGTGGTAAATCCCAACACAGGAAATCTGGGCAGAGTGAGTTCAAAACTAGAAAGGCCTACTTCTATTGCGTGACTAGAGAACAAGGTTCTTTTGACTGGTTTAAAGGGGTAATGAACGAGACAGCTGAAGCAGACCATCGTGGAGTGATTGAGCTCCACAATTACTGCACTAGTGTCTATCAAGAAGGTGACGCACGTTCTGCTCTCATCGCTATGCTACAGTTTCTAAACAACCAAAAGAATGGCGTCGACATTGTCTCAGGAACTCGTGTCATGACTCACTTTGCTAAACCCAATTGA 2766 0.4367 MLSGLAAHFCRSFIPLKNYKWTRGSLIFFPLSFSQHQSVSYKYIHPSFLQDRMQPKSASESKKLSREKKGADSEVIGTSSDLHNRESDIELIGGERVPHSDPLSGPLNKRVGRKSLQFSVPESSTAINVARSSACNKPEDGDEGAFVEVTMDMQGDSVALHSVKTVAGGDVREDEKSGLLKDLEKKTSLGASIVRNASIKVKHVSQELKRLASFSKSAAPVKHYDRSKSAAAHALKRLKLISRTDGCAGWDEVEKQFDKLTATTDGYLPRALFGKCIGMSKKSEAFALELFDALSRKRRIQGDSINKAHLKDLWDQISDQSFDSRLRIFSDMVDKDADGRITEEEIKEIILLSATTNKLTRIQKQAEEYAALIMEELDPAETGFIMIAYLELLLLHGPENSKRGHSKYLSQMLRQKLMPTYDNNVIRRRYRDTSYFFLQDNCKRAWVLALWTGVMAGLFAYKYMQYRERDDVYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTITWIRSKTRLGVVVPFDDNLNFHKVIAVGVTFGVGIHAIYHLTCDFPRLLDASNEKDYNGSANGNSIHPGHPLVQARQSEATRPLDMLTGFNAFWYSHHLFVIVYAMLIVHGEKLYLTKKWYKKTTWMYLAIPVIIYVLERLIRALRASIKGVRILKVAVYPGNVLAIHMSKPPGFRYRSGQYMFVNCDAVSPFEWHPCSITSAPGDDYLSVHIRTAGDWTRSLKAKLLEACRPPPDGKSGLLRAESVLGDGSPSSLPKVLIDGPYGAAAQDYQKYEVVLLVGLGIRAIPMISIVKDIVNNYKAMEEEEEMALEEGASGKSQHRKSGQSEFKTRKAYFYCVTREQGSFDWFKGVMNETAEADHRGVIELHNYCTSVYQEGDARSALIAMLQFLNNQKNGVDIVSGTRVMTHFAKPN 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1595 921 Pfam Respiratory burst NADPH oxidase 224 324 IPR013623 GO:0004601|GO:0050664
Lele22g1595 921 MobiDBLite consensus disorder prediction 56 80 - -
Lele22g1595 921 FunFam Respiratory burst oxidase homolog A 224 342 - -
Lele22g1595 921 Pfam Ferric reductase NAD binding domain 781 921 IPR013121 GO:0016491
Lele22g1595 921 MobiDBLite consensus disorder prediction 52 80 - -
Lele22g1595 921 Gene3D - 772 921 IPR039261 -
Lele22g1595 921 Gene3D - 224 342 - -
Lele22g1595 921 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 648 777 IPR017927 GO:0016491
Lele22g1595 921 PANTHER NADPH OXIDASE 284 921 - -
Lele22g1595 921 ProSiteProfiles EF-hand calcium-binding domain profile. 321 356 IPR002048 GO:0005509
Lele22g1595 921 SFLD NADPH oxidase subgroup (NOX) 179 921 - -
Lele22g1595 921 Coils Coil 800 820 - -
Lele22g1595 921 Pfam FAD-binding domain 656 774 IPR013112 GO:0016491
Lele22g1595 921 Pfam Ferric reductase like transmembrane component 485 614 IPR013130 -
Lele22g1595 921 FunFam Respiratory burst oxidase homolog A 644 736 - -
Lele22g1595 921 Gene3D Translation factors 645 735 - -
Lele22g1595 921 SUPERFAMILY Riboflavin synthase domain-like 658 773 IPR017938 -
Lele22g1595 921 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Lele22g1595 921 SUPERFAMILY EF-hand 249 388 IPR011992 -
Lele22g1595 921 CDD NOX_Duox_like_FAD_NADP 660 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1595 Lele-ChrLele22 21535369 21539929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1595 99 921 Miscellaneous Gene Families AT5G51060 58.016 0.0 945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1595 22 21535369 21539929 Lele22g1595 22 21535369 21539929 ECH
Lele22g1595 22 21535369 21539929 Lele23g0398 23 2880518 2885087 hybridization
Lele22g1595 22 21535369 21539929 Lele24g1559 24 21299560 21304049 hybridization