Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1559 ATGGGAGCTGACAACGAGGTGATAGGAACTTCATCAGATCTTCATAATCGTGAATCAGACATAGAACTCACTGGAGGCGAGAGGGTCCCTCATAGTGATCCATTAACTGGACCTTTGACCAAAAGGGTTGGAAGGAAAAGCCCCCAGTTCAGTGTTCCCGAATCCAGCACCGCCATTAATGTTGCTAGAAGCAGTGCTTGCAACAAACCAGAGGATGGAGACGAAGGAGCCTATGTTGAGGTCACAATGGATATACAAGGAGATTCTGTTGCTTTACACAGCGTTAAAACAGTTGCAGGTGGGGATGTACGTGAAGACAAGAGATCTGGTTTGCTTAAAGATCTTGAGAAGAAAGCATTATTTGGTGCTTCAATTGTTCGTAATGCTTCTATTAAAGTGAAGCATGTGTCTCAGGAACTGAAGCGTTTGGCTTCATTTTCAAAGCCAGCAGCACCGGTGAAACGCTATGATAGGTCTAAATCTGCAGCTGCTCATGCTCTTAAGGGACTCAAGTTAATCCGTAAAACTGTTGGTAGTGCAGGTTGGGATGAGGTTGAGAAGCAATTTGATAAGCTTACTGCTACTACAGATGGTTATCTTCCTCGTTCTCTCTTTGGAAAATGTATAGGAATGAGCAAGAAATCTGAGGCTTTTGCATTGGAGCTGTTTGATGCTCTTGCTCGGAAGAGAGGAATTCAGGGGGATTCCATTAACAAGGCACATCTGAAGGATTTGTGGGACCAGATTTCCGACCAAAGCTTTGATTCCAGGCTTAGAATATTCTTTGACATGGTGGATAAAGAGGCAGATGGTAGAATCACCGAGGAAGAAATCAAAGAGATTATCTTGCTTAGCGCCACTACCAACAAACTCAAGCATATCCAGAAACAAGCAGAAGAATGTGCAGCTTTGATTATGGAAGAACTAGACCCAGCTGAAACAGGATTTATCATGATAGACAACCTGGAGTTGTTATTGTTGCATGGACCTGAAAATTCTAAAGGAGGACACGGCAAGTACCTGAGCCAAATGCTAAGCCAAAAGCTTATGCCTACCTATGACAACAATGTTATTAGAAGACGGTACCGGGACACCTCATACTTCTTACAGGATAATTGGAAGAGAGCTTGGGTGTTGGCACTGTGGACGGGTGTGATGGCAGGTCTATTTGCCTACAAGTACGTCCAGTATCGAGAAAGAGACGACGTGTATGAGGTAATGGGCCATTGTGTGTGCATGGCGAAAGGTGCAGCTGAGACACTAAAATTGAACATGGCTCTTATTTTGTTACCTGTTTGCCGAAACACCCTCTCCTGGATCAGGACTAAGACCAGGCTAGGTGTTGTGGTTCCTTTTGATGACCACCTCAACTTCCACAAGGTGATAGCTGTGGGAGTAACATTTGGCGTTGGTATACATGCTATTTATCATCTTACTTGTGATTTTCCTCGCCTTCTTGATGCAAGTAATGAAAAGTTCATGTCTATGGTGCAATATTTTGGACCTAAACCTACTAGTTATTGGCATTTTGTCAAATCATGGGAAGGAGTGACAGGGATTATAATGGTAGTGCTAATGGCAATAGCATTCACCCTGGCCACCTCTTGGTTCAGGAGAGGCAGAGTGAAGCTACCCAGACCCCTCGACATGCTCACCGGTTTCAACGCCTTTTGGTATTTCCATCACCTCTTCGTCATTGTGTATGCCATGTTGATTAGAGCACTCAGACCAAGCATCAAGGGAGTGAGAATATTAAAGGTGGCTGTTTATCCTGGAAATGTGTTAGCAATTCACATGTCAAAGCCTCGTGGGTTTAGATACAGGAGTGGACAGTACATGTTTGTCAACTGTGATGCTGTATCTCCGTTTGAATGGCATCCGTTCTCCATAACCTCGGCCCCTGGGGATGACTACCTTAGTGTTCATATTCGAACAGCAGGTTACTGGACCCGAAGCATAAAAGCAAAATTATTAGAGGCATGCCGACCTCCACCGGATGGGAACAGTGGACTTCTAAGAGCTGAAAGCGTGCTAGGAGATGGCAGTCCAAGCTCTCTTCCTGAAGTTCGGATTGATGGTCCATATGGGGCAACAGCTCAAGACTATCAGAAGTATGAAGTGGTTTTACTAGTGGGATTAGGAATTGGAGCTACCCCAATGATCAGTATAGTGAAGGACATAGTTAATAACTACAAGGCGATGGAAGAAGAGGAGATGGCGTTAGAGGAAGGAGCAAGTGGTAAATCCCAACACAGGAAATCTGGCCACAGTGAGTTCAAAACTAGAAAGGCCTACTTCTATTGCGTGACTAGAGAACAAGGTTCTTTTGACTGGTTTAAAGGGTTAATGAACGAGACAGCTGAAGCAGACCATGGTGGAGTGATGGAGCTCCACAATTACTGCACTAGTGTCTATGGAGGTGGTGACGCACGTTCTGCTCTTATTGCTATGCTACAGTTTCTAAACCTCCAAAAGAATGGCGTCGACACTGTCTCAGGAACTCGTGTCATGACTCACTTTGCTAGACCCAATTGGCGAAGGGTGTACACACGCATTGCGCTTGCTCATCCACAAGCTCGAGTTGGGGTGTTTTACTGTGGGATTAACGCGCTCGCTGTAGAGCTTCGCCACTTGGCTTTGGATTTCTCTCACATGACAAGGACGAAATTCTACTTCCATAAACAAAATTTCTAA 2694 0.448 MGADNEVIGTSSDLHNRESDIELTGGERVPHSDPLTGPLTKRVGRKSPQFSVPESSTAINVARSSACNKPEDGDEGAYVEVTMDIQGDSVALHSVKTVAGGDVREDKRSGLLKDLEKKALFGASIVRNASIKVKHVSQELKRLASFSKPAAPVKRYDRSKSAAAHALKGLKLIRKTVGSAGWDEVEKQFDKLTATTDGYLPRSLFGKCIGMSKKSEAFALELFDALARKRGIQGDSINKAHLKDLWDQISDQSFDSRLRIFFDMVDKEADGRITEEEIKEIILLSATTNKLKHIQKQAEECAALIMEELDPAETGFIMIDNLELLLLHGPENSKGGHGKYLSQMLSQKLMPTYDNNVIRRRYRDTSYFLQDNWKRAWVLALWTGVMAGLFAYKYVQYRERDDVYEVMGHCVCMAKGAAETLKLNMALILLPVCRNTLSWIRTKTRLGVVVPFDDHLNFHKVIAVGVTFGVGIHAIYHLTCDFPRLLDASNEKFMSMVQYFGPKPTSYWHFVKSWEGVTGIIMVVLMAIAFTLATSWFRRGRVKLPRPLDMLTGFNAFWYFHHLFVIVYAMLIRALRPSIKGVRILKVAVYPGNVLAIHMSKPRGFRYRSGQYMFVNCDAVSPFEWHPFSITSAPGDDYLSVHIRTAGYWTRSIKAKLLEACRPPPDGNSGLLRAESVLGDGSPSSLPEVRIDGPYGATAQDYQKYEVVLLVGLGIGATPMISIVKDIVNNYKAMEEEEMALEEGASGKSQHRKSGHSEFKTRKAYFYCVTREQGSFDWFKGLMNETAEADHGGVMELHNYCTSVYGGGDARSALIAMLQFLNLQKNGVDTVSGTRVMTHFARPNWRRVYTRIALAHPQARVGVFYCGINALAVELRHLALDFSHMTRTKFYFHKQNF 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1559 897 Pfam FAD-binding domain 580 698 IPR013112 GO:0016491
Lele24g1559 897 MobiDBLite consensus disorder prediction 11 27 - -
Lele24g1559 897 CDD NOX_Duox_like_FAD_NADP 584 805 - -
Lele24g1559 897 SUPERFAMILY Riboflavin synthase domain-like 582 697 IPR017938 -
Lele24g1559 897 PRINTS Cytochrome B-245 heavy chain signature 857 875 IPR000778 GO:0016020|GO:0016491
Lele24g1559 897 PRINTS Cytochrome B-245 heavy chain signature 462 480 IPR000778 GO:0016020|GO:0016491
Lele24g1559 897 PRINTS Cytochrome B-245 heavy chain signature 554 574 IPR000778 GO:0016020|GO:0016491
Lele24g1559 897 PANTHER NADPH OXIDASE 216 897 - -
Lele24g1559 897 Pfam Ferric reductase like transmembrane component 416 572 IPR013130 -
Lele24g1559 897 SUPERFAMILY EF-hand 178 329 IPR011992 -
Lele24g1559 897 FunFam Respiratory burst oxidase protein A 696 897 - -
Lele24g1559 897 FunFam Respiratory burst oxidase homolog A 569 660 - -
Lele24g1559 897 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Lele24g1559 897 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 577 701 IPR017927 GO:0016491
Lele24g1559 897 MobiDBLite consensus disorder prediction 1 56 - -
Lele24g1559 897 Pfam Respiratory burst NADPH oxidase 155 256 IPR013623 GO:0004601|GO:0050664
Lele24g1559 897 Gene3D Translation factors 571 657 - -
Lele24g1559 897 Pfam Ferric reductase NAD binding domain 705 879 IPR013121 GO:0016491
Lele24g1559 897 FunFam Respiratory burst oxidase homolog A 156 274 - -
Lele24g1559 897 Gene3D - 156 274 - -
Lele24g1559 897 Gene3D - 696 897 IPR039261 -
Lele24g1559 897 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 688 792 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1559 Lele-ChrLele24 21299560 21304049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1559 21 897 Miscellaneous Gene Families AT5G51060 58.531 0.0 1043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1559 24 21299560 21304049 Lele24g1559 24 21299560 21304049 ECH
Lele21g1612 21 24134544 24139099 Lele24g1559 24 21299560 21304049 hybridization
Lele22g1595 22 21535369 21539929 Lele24g1559 24 21299560 21304049 hybridization