Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1501 ATGTACCTTGTGTTTTCCCATCCCAGTAGTAATGTTCTTTCCATAAATCTTAGTGGCACAAGATGTATGCGTGTGGTTTGGGGAGAAATATACAAAGTACCGTACACTTCATCTGTTTACAAAGTACAAGACACTTATAATCAAAACTTGAAGGTTAAGATTTTAGTCATTACGAAAATCTTATGCAAAGAAAAACGCAAACCACCTTTGAAAGGGGAAGCACCTATTGGACTCCCATGGAAAGGTGCGGGTCAAGATTCATCAGATGCACAACCAAGGCCAAATGGGAGTACCCCCAAGGCCAGGGATGCTTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAGAGAATTCGAAAGGCTTCAATATATGGGAATTTTCCTGGTTGGGACTTGCGATCTGCTTCTATGCATTCTCTCAAAAGCAGATATCCCAACATTTCAAGTTTACGTGACTTCTTTGTTGCCAAGTATCAACAAAATTCTCCAAGTTTCAAACTTGCCCAGAGGAACTTTGTTGAGAGTATGGCTGGATATTCCCTCGTTTGCTACCTTCTGCAGGATCGGCATAATGGGAACCTTTTAATGGATGAAGAAGGTCATATCATACATATTGACTTTGGCTTCATGCTTTCAAATTCCACTGGTGGTGTTAACTTTAAAAGTGCTCCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGAATTCTGATGCTGAAGGCATTCCAACTAAATTTGTCTTGATGCATTTCCCATTGTGTTCCAGGTTTTATGCATTCAAGGCTTCCTTACTTGACTCAGGTTTCCCATGCTTTAAAGGTGGTACCCGGACAATACAGAACTTACGAAAACGATTTCATCTCAGTTTAACAGAAGAGATGGTACCTGGTCCTTTTGGGAGAATTCATGGACCCACCTCCATTTTTGGGGAAGTGCTGACTCAGCTGTTCCCAGAGTTTGATTCTTGA 966 0.413 MYLVFSHPSSNVLSINLSGTRCMRVVWGEIYKVPYTSSVYKVQDTYNQNLKVKILVITKILCKEKRKPPLKGEAPIGLPWKGAGQDSSDAQPRPNGSTPKARDALSGELWEAKKERIRKASIYGNFPGWDLRSASMHSLKSRYPNISSLRDFFVAKYQQNSPSFKLAQRNFVESMAGYSLVCYLLQDRHNGNLLMDEEGHIIHIDFGFMLSNSTGGVNFKSAPFKLTRELLEVMNSDAEGIPTKFVLMHFPLCSRFYAFKASLLDSGFPCFKGGTRTIQNLRKRFHLSLTEEMVPGPFGRIHGPTSIFGEVLTQLFPEFDS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1501 321 PANTHER PHOSPHATIDYLINOSITOL KINASE 133 292 IPR015433 GO:0046854|GO:0048015
Lele22g1501 321 Gene3D - 134 300 IPR036940 GO:0016301
Lele22g1501 321 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 310 IPR000403 -
Lele22g1501 321 Pfam Phosphatidylinositol 3- and 4-kinase 147 237 IPR000403 -
Lele22g1501 321 SUPERFAMILY Protein kinase-like (PK-like) 128 293 IPR011009 -
Lele22g1501 321 MobiDBLite consensus disorder prediction 72 105 - -
Lele22g1501 321 SMART pi3k_hr1_6 100 319 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1501 Lele-ChrLele22 20711346 20717310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1501 56 294 Lipid Metabolism Gene Families AT5G09350 58.766 1.95e-101 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1501 22 20711346 20717310 Lele23g0503 23 3688247 3690309 hybridization
Lele22g1501 22 20711346 20717310 Lele24g1456 24 20452814 20460651 hybridization