Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0503 ATGTTCCCATTCATGTATACAATTTTCAATGTTGCTGCTGAAATTTCCACTTTTGGTAGGCTGCAGCAGCGAAAGGAAGGTGCGGGTCAAGTGTCATCAGATGCACAACCAAGGCCGAATGGGAGTACACCCAAGGCCGGTGATGCTTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAGAGAATTCGAAAGGCTTCAATATATGGGAATTTTCCTGGTTGGGACTTGCGATCTGTTATTGTAAAGAGTGGTGACGATTGCAGACAAGAGCATCTGGCAGTTCAACTTATTTCTCACTTCTATGATATATTCCAAGAAGCTGGTTTACCTCTCTGGTTGAGGCCTTATGAAGTTTTATGCGCTTCTTCATACACAGCCCTTATAGAAACAATTCCAGATACGATTAAGGATCGGCATAGTGGGAACCTTTTAATGGATGAAGAAGGTCATATCATACATATTGACTTTGGCTTCCTGCTTTCAAATTCCCCTGGTGGTGTTAACTTTGAAAGTGCTCCTTTCAAATTAACTCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAAGGCATTCCAAGTGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGTCAAAAACATGCTGAGCGCGTTATTCTTCTAGTTGAGATGTTGCAGGATAAGACTAATGCGCACTTTGCTATGGTCTAG 708 0.4195 MFPFMYTIFNVAAEISTFGRLQQRKEGAGQVSSDAQPRPNGSTPKAGDALSGELWEAKKERIRKASIYGNFPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCASSYTALIETIPDTIKDRHSGNLLMDEEGHIIHIDFGFLLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCQKHAERVILLVEMLQDKTNAHFAMV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0503 235 SMART pi3k_hr1_6 78 235 IPR000403 -
Lele23g0503 235 SUPERFAMILY Protein kinase-like (PK-like) 59 227 IPR011009 -
Lele23g0503 235 Pfam Phosphatidylinositol 3- and 4-kinase 135 222 IPR000403 -
Lele23g0503 235 Gene3D - 127 234 IPR036940 GO:0016301
Lele23g0503 235 MobiDBLite consensus disorder prediction 26 50 - -
Lele23g0503 235 PANTHER PHOSPHATIDYLINOSITOL KINASE 135 227 IPR015433 GO:0046854|GO:0048015
Lele23g0503 235 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 81 95 IPR018936 GO:0016301
Lele23g0503 235 MobiDBLite consensus disorder prediction 26 40 - -
Lele23g0503 235 FunFam Phosphatidylinositol 4-kinase beta 1 45 131 - -
Lele23g0503 235 Gene3D - 10 126 - -
Lele23g0503 235 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 235 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0503 Lele-ChrLele23 3688247 3690309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0503 26 226 Lipid Metabolism Gene Families AT5G09350 70.472 1.30e-116 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1510 21 23361649 23372851 Lele23g0503 23 3688247 3690309 hybridization
Lele22g1501 22 20711346 20717310 Lele23g0503 23 3688247 3690309 hybridization