Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1456 ATGATTCATCAGATGCACAACCAAGGGTATTGCTTAACTCTTTTTGTTATTGTAAAGAGTGGTGACGATTGCAGACAAGAGCATCTGGCGGTTCAACTTATTTCTCACTTCTTGATATTCCAAGAAGCTGGTCTACCTCTCTGGTTGCTGCCTTATGAAGTTTTATGCACTTCTTCATACACAGCCCTTATGGAAACAATTCCAGATAAGGAAATGCTGCTTCTATACACTCTCAAAAGCAGATATCCCAACATTTCAAGTTTACATGATTTCTTTGTTGCCAAGTATCAAGAAAATTCTCCAAGTTTCAAACTTGCCCAGCGGAACTTTGTTGAGAGTATGGCTGGATATTCCCTCGTTTGCTACCTTCTGCAGATTAAGGATCGGCATAATGGGAACCTTTTAATGGATGAAGAAGGTCATATCATACATAATGACTTTGGCTTCATGCTTTCAAATTCTCCTGGTGGTGTTAACTTTGAAAGTGCTCCTTTCAAATTAACCGGAGAGCTTCTTGAGATCATAGATTCTGATGCTGAAGGCATTCCAAGTGAGTTCTTGGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGTCGAAAACATGCCGAGCGCATTATTCTTTTAGTTGAGATGTTGCAGGTGTCTTTGTGTGGCTCAGGTTTCCCATGCTTTAAAGGTGGTCCACGGACAATACAGAACTTACGAAAACGATTTCGTCTGAGTTTAATAGAAGAGGTGGAATTTGTTCACCATGTCGATCAATCAATCAAATATGAAGTTTTGGATGGATTTCAGTTGTTTCTTTGGATATGTGTACAGTACCTTTCACCTAAATGTATCTGTATCATTGGCTCTCACAAATGTTCAGCATTTGGTGTTTTTGGAGAGTCTTGCCCGCCTCCTTCCCTGGATTCCATTGCGCAGATGTCTTTTTATCTCCTAAAGGGATCGACATCCATTGTTGGGTGCCTTTTTAGCTTCATGAACCGGGGAAGGCTGTGGTGTCTGGGGAAGATTTTGTTTCGGCATTGGACTTGA 1047 0.4059 MIHQMHNQGYCLTLFVIVKSGDDCRQEHLAVQLISHFLIFQEAGLPLWLLPYEVLCTSSYTALMETIPDKEMLLLYTLKSRYPNISSLHDFFVAKYQENSPSFKLAQRNFVESMAGYSLVCYLLQIKDRHNGNLLMDEEGHIIHNDFGFMLSNSPGGVNFESAPFKLTGELLEIIDSDAEGIPSEFLDYFKVLCIQGFLTCRKHAERIILLVEMLQVSLCGSGFPCFKGGPRTIQNLRKRFRLSLIEEVEFVHHVDQSIKYEVLDGFQLFLWICVQYLSPKCICIIGSHKCSAFGVFGESCPPPSLDSIAQMSFYLLKGSTSIVGCLFSFMNRGRLWCLGKILFRHWT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1456 348 SUPERFAMILY Protein kinase-like (PK-like) 14 261 IPR011009 -
Lele24g1456 348 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 18 32 IPR018936 GO:0016301
Lele24g1456 348 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 266 IPR000403 -
Lele24g1456 348 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 113 133 IPR018936 GO:0016301
Lele24g1456 348 Gene3D - 3 67 - -
Lele24g1456 348 Pfam Phosphatidylinositol 3- and 4-kinase 16 212 IPR000403 -
Lele24g1456 348 Gene3D - 77 265 IPR036940 GO:0016301
Lele24g1456 348 PANTHER PHOSPHATIDYLINOSITOL KINASE 15 261 IPR015433 GO:0046854|GO:0048015
Lele24g1456 348 SMART pi3k_hr1_6 15 280 IPR000403 -
Lele24g1456 348 FunFam PIK1p Phosphatidylinositol 4-kinase 77 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1456 Lele-ChrLele24 20452814 20460651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1456 16 248 Lipid Metabolism Gene Families AT5G09350 85.897 8.02e-135 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1510 21 23361649 23372851 Lele24g1456 24 20452814 20460651 hybridization
Lele22g1501 22 20711346 20717310 Lele24g1456 24 20452814 20460651 hybridization