Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1407 ATGGCCCCTCAGTGGCTGTTGGTTTGGGTAATGGTGTACTTTCTGCATGGGAATGCAATGCCGATCACGTTTTCTGTGAGGCTGATTCATCGCTTCTCTAAAGAAATGAAGGCGCTCCATGTTGCGAGTGTTGGTGGTGGTCGTAATATGTCTGGTGGCTGGCCGGAGAAGAAGAGTATGGAATACTACGAGATGCTTGTTAACGGCGACTTTCTCAGGCACAAGATGAAGCTTCGAGCTCCACATCAGTTGCTTTTCCCATCTCACGGCAGCAAAACGATGTCCCTTGGAAACGACTTTGGCTGGTTACATTATACATGGATTGATATAGGGACGCCAAGTACTTCATTTCTTGTAGCACTGGATGCTGGGAGCGATCTACTTTGGGTTCCTTGTGATTGCATACAGTGTGCTCCCCTATCTGCAAGTTACTATGCCAATCTGGATAGAGATTTGAATGAGTATAGTCCATCTCGATCAACATCCAGCAAGAATCTATCTTGCAGCCATCAGTTATGTGAGATGGGTTCCGACTGTAAGAGTTCCAGGCAGCAGTGTCCTTACACTGCCAATTATGTCTCAGAGAATACATCAAGTTCCGGATTGTTAGTAGAGGACATATTGCATCTTGCGTCAAGTGGTGATGGTGAATCGAACTCTACAGTTCAGGCTTCAGTCGTTATAGGGTGCGGTATGAAGCAAAGTGGTGATTATTTGGATGGGGTTGCTCCAGATGGCCTTCTCGGTTTGGGAACCGGGGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGGATTAATCCATAATTCTTTCTCAATGTGCTTTCACGATGATGATTCTGGTAGAATATTCTTTGGGGACCAGGGATCAGCCATCCAACAGTCTACTCCATTCCTGCCATTGGATGGAATATATTCAACATATGTTATTGGAGTGGAGGCATGTTGTATCAAGGATTCATGTCTTAAGATGACAAGCTTCAAAGCACAGGTTGATAGTGGAACATCGTTTACATTTCTTCCAGGCCATGTCTATGATGCAATTACTGAGGAGTTTGACCAACAAGTGAATGGTTCGAGATCTACATTTGAAGGATCCCCTTGGGACTATTGCTATGCTTCTAGTTCACCTGAGCTGCCCAAGGTTCCCTCCCTCACATTTACGTTCCAACAGAATAGCAGCTTTATGGTCCCTAATCCAGTATTTGTATTTTATGACAATGAGGTTGTTATTGGATTTTGTTTAGCCATTCAGCCAACAGATGGAGATATGGGAACAATTGGACAGAAATTCATGACAGGCTACAGGCTGGTATTTGATAGGGAAAACATGAAGCTATCCTGGTTGCCGTCAAGTTGTGAGGATCTTGCTGATAAGAGCACGTCCCCTCCAAATAAGATGCCGCCAAAACCCTTGCCGACAAATGAGCAGCAAAGAACCAATGGGCATGCAGTCGCTCCAGCTGTTGCTGGAAGAGCTCCCAACAAACCATCAACTGCTTCATCTCGGATGATGTCATGCCGGCGACAACATTGGCACATTTGCTTGTTCCTTCTTCTTCTTCAACTTGTAGTAGCCTCTATAAGGCTTTATTAA 1596 0.4486 MAPQWLLVWVMVYFLHGNAMPITFSVRLIHRFSKEMKALHVASVGGGRNMSGGWPEKKSMEYYEMLVNGDFLRHKMKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIQCAPLSASYYANLDRDLNEYSPSRSTSSKNLSCSHQLCEMGSDCKSSRQQCPYTANYVSENTSSSGLLVEDILHLASSGDGESNSTVQASVVIGCGMKQSGDYLDGVAPDGLLGLGTGEISVPSLLAKSGLIHNSFSMCFHDDDSGRIFFGDQGSAIQQSTPFLPLDGIYSTYVIGVEACCIKDSCLKMTSFKAQVDSGTSFTFLPGHVYDAITEEFDQQVNGSRSTFEGSPWDYCYASSSPELPKVPSLTFTFQQNSSFMVPNPVFVFYDNEVVIGFCLAIQPTDGDMGTIGQKFMTGYRLVFDRENMKLSWLPSSCEDLADKSTSPPNKMPPKPLPTNEQQRTNGHAVAPAVAGRAPNKPSTASSRMMSCRRQHWHICLFLLLLQLVVASIRLY 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1407 531 Pfam Xylanase inhibitor C-terminal 326 447 IPR032799 -
Lele22g1407 531 Gene3D Acid Proteases 79 287 IPR021109 -
Lele22g1407 531 SUPERFAMILY Acid proteases 98 456 IPR021109 -
Lele22g1407 531 ProSiteProfiles Peptidase family A1 domain profile. 104 449 IPR033121 -
Lele22g1407 531 Gene3D Acid Proteases 289 455 IPR021109 -
Lele22g1407 531 PRINTS Pepsin (A1) aspartic protease family signature 110 130 IPR001461 GO:0004190|GO:0006508
Lele22g1407 531 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Lele22g1407 531 PRINTS Pepsin (A1) aspartic protease family signature 425 440 IPR001461 GO:0004190|GO:0006508
Lele22g1407 531 Pfam Xylanase inhibitor N-terminal 105 287 IPR032861 -
Lele22g1407 531 FunFam Aspartyl protease family protein 1 290 455 - -
Lele22g1407 531 FunFam Aspartyl protease family protein 1 90 287 - -
Lele22g1407 531 Coils Coil 528 531 - -
Lele22g1407 531 MobiDBLite consensus disorder prediction 455 502 - -
Lele22g1407 531 PANTHER ASPARTYL PROTEASES 44 447 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1407 Lele-ChrLele22 19877578 19881832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1407 79 456 Miscellaneous Gene Families AT1G77480 25.124 5.15e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1407 22 19877578 19881832 Lele22g1407 22 19877578 19881832 ECH
Lele21g1417 21 22641399 22645943 Lele22g1407 22 19877578 19881832 ECH
Lele22g1407 22 19877578 19881832 Lele23g0598 23 4482196 4486784 hybridization
Lele22g1407 22 19877578 19881832 Lele24g1360 24 19656010 19660386 hybridization