Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1417 ATGGCCCCTCAGTGGCTGTTGGTTTGGGTAATGGCGTCCTTTCTCCATGGGAATGCAATGCCGATCACGTTTTCTGTGAGGCTGATGCATCGCTTCTCTGAAGAAATGAAGGCGCTCCAGTTTGCGAGTAGTGGTGGTGGTGGTTGTCGTAATATGTCTGGTGGCTGGCCGGAGAAGAAGAGTATGGAATACTACGAGACGCTTGTTAGCGGCGACTTTCTCAGGCATACGAGGAAGCTTCGAGCACCACATCAGTTGCTTTTTCCCTCTCACGGCAGCAAAACGATGTCTCTTGGAAACAACTTTGGCTGGTTACATTACACATGGATTGATATAGGGACGCCAAGTACTTCATTTCTTGTAGCACTGGATGCTGGGAGTGATCTACTTTGGGTTCCATGTGATTGCATACAGTGTGCTCCTCTGTCTGCAAGTTTCTATGCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCACGATCAACATCCAGCAAGAATCTATCTTGCAGCCATCAGTTATGTGACATGGGTTCCAACTGTGAGAGTTCCAGGCAGCAGTGTCCTTACACTGCCAATTACGTCTCAGAGAATACATCAAGTTCTGGATTGTTAGTAGAGGACATATTGCACCTTGCTTCAAGTGGGGACGGTGAATCGAACTCTACAGTTCATGCTTCAGTCGTTATAGGGTGCGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGCCTTCTGGGTTTGGGAACCGGGGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGGATTAATCCATAATTCTTTCTCAATGTGCTTTGACGATGATGATTCTGGTAGAATATTCTTTGGGGACCAGGGATCAGCCATCCGACAGTCTACTCCATTCCTGCCATTGGATGGAATATATTCAACATATGTTATTGGAGTGGAGGCATGTTGTATCAAGGATTCATGTCTTAAGATGACTAGCTTCAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCAGGCCATGTTTATGATGCAATTACTGAGGAGTTTGACCAACAAGTGAATGCTTCGAGATCCACCTTTGAAGGATCCCCTTGGGACTATTGCTATGCTTCTAGTTCACCTGAGCTGCCCAAGGTTCCCTCCCTCACATTTACTTTCCAACAGAATAGCAGCTTTGTGGTCCATAATCCTGTATTTGTATTTTATGACGATCAGGGAGTTATTGGATTTTGTTTGGCCATACAGCCAACAGATGGAGATATGGGAACAATTGGACAGAACTTCATGACAGGCTACAGGCTGGTATTTGATAGGGAAAACATGAAGCTGTCCTGGTTGCGGTCAAGTTGTGAGGATCTTGCTGGTAAGAGTATGTCCCCTTCAAATAAGACGTCGCCAAAACCCTTGCCGACAAATGAGCAGCAGAGGACCAATGGGCATGCGGTCGCTCCAGCTGTTGCTGGAAGAGCTCCCCACAAACCATCAACTGCTTCATCTCGGATAATGTCATGCCGACGACAACATTGGCATATTTGCTTGGTTCTTCTTCAACTTGTAGGAGTAGCCGCCTCTTTAAGGCTTTAA 1599 0.459 MAPQWLLVWVMASFLHGNAMPITFSVRLMHRFSEEMKALQFASSGGGGCRNMSGGWPEKKSMEYYETLVSGDFLRHTRKLRAPHQLLFPSHGSKTMSLGNNFGWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIQCAPLSASFYANLDRDLNEYSPSRSTSSKNLSCSHQLCDMGSNCESSRQQCPYTANYVSENTSSSGLLVEDILHLASSGDGESNSTVHASVVIGCGMKQSGGYLDGVAPDGLLGLGTGEISVPSLLAKSGLIHNSFSMCFDDDDSGRIFFGDQGSAIRQSTPFLPLDGIYSTYVIGVEACCIKDSCLKMTSFKAQVDSGTSFTFLPGHVYDAITEEFDQQVNASRSTFEGSPWDYCYASSSPELPKVPSLTFTFQQNSSFVVHNPVFVFYDDQGVIGFCLAIQPTDGDMGTIGQNFMTGYRLVFDRENMKLSWLRSSCEDLAGKSMSPSNKTSPKPLPTNEQQRTNGHAVAPAVAGRAPHKPSTASSRIMSCRRQHWHICLVLLQLVGVAASLRL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1417 532 Gene3D Acid Proteases 81 289 IPR021109 -
Lele21g1417 532 FunFam Aspartyl protease family protein 1 92 289 - -
Lele21g1417 532 MobiDBLite consensus disorder prediction 459 484 - -
Lele21g1417 532 Pfam Xylanase inhibitor C-terminal 328 449 IPR032799 -
Lele21g1417 532 PANTHER ASPARTYL PROTEASES 39 449 IPR001461 GO:0004190|GO:0006508
Lele21g1417 532 Gene3D Acid Proteases 291 457 IPR021109 -
Lele21g1417 532 SUPERFAMILY Acid proteases 100 457 IPR021109 -
Lele21g1417 532 ProSiteProfiles Peptidase family A1 domain profile. 106 451 IPR033121 -
Lele21g1417 532 MobiDBLite consensus disorder prediction 458 504 - -
Lele21g1417 532 Pfam Xylanase inhibitor N-terminal 107 289 IPR032861 -
Lele21g1417 532 PRINTS Pepsin (A1) aspartic protease family signature 427 442 IPR001461 GO:0004190|GO:0006508
Lele21g1417 532 PRINTS Pepsin (A1) aspartic protease family signature 331 342 IPR001461 GO:0004190|GO:0006508
Lele21g1417 532 PRINTS Pepsin (A1) aspartic protease family signature 112 132 IPR001461 GO:0004190|GO:0006508
Lele21g1417 532 FunFam Aspartyl protease family protein 1 292 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1417 Lele-ChrLele21 22641399 22645943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1417 81 458 Miscellaneous Gene Families AT1G77480 25.432 3.12e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1417 21 22641399 22645943 Lele21g1417 21 22641399 22645943 ECH
Lele21g1417 21 22641399 22645943 Lele22g1407 22 19877578 19881832 ECH
Lele21g1417 21 22641399 22645943 Lele23g0598 23 4482196 4486784 hybridization
Lele21g1417 21 22641399 22645943 Lele24g1360 24 19656010 19660386 hybridization