Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1984 ATGGACTTCTGGATCAAAGCTCGAAGCTTAGCCGAGGAAGCCGCCAAGCGCTCCAAGGAAATCGTCTCTGAAGCTTCCATGCGAGCCGATCAAATTCGAACTGCAGCCTTGAAGCGAGCTGACCAGTTCAAACACTTGGCCCAGGGGATTCATCCTCCCGGCGGCGGTGTTGACCCTCCGCCGGCGGAATCCTATGAAGTAAGTTGCTATCAAGAGAAGGAGCTAGAGAGGTTCGGTATCACCGAAGAATTGAGAGAGTTCGTGAAAGGGATCACTCCAAGCACGTTTCGAGATTTTCCTCTCGAAGATGACACGCAGCTTTCTGACGTTCCTACGGTTTCTAATGTTAGGAAGGATCTTACTGAGTGGCAGGAAAAACATGCCCATCTTGTTTTGTCTACTGTCAAGGAGATTTCAAAATTAAGGTATGAGCTGTGTCCACGTGCCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATTCTTATGAACAGACATATTTCCCCCTATGAGAAGAGGTACATGGAGGATGCTAATCTAGAATCATCTGAACAAGAAGATAAGAAAGCGTTTGACTCACCAGAAAAAGAAGTAAAAGGTGGGGAAGCAATCAAACCCCCGGAAGCACAAGTAAAAGTTGAGAAAGCAATTGAACCCCCAGAAGGTGGACTGACTTCCATTCAGGGAGAGCTCGAGGTTAAAAAGGAGAGCAGAACTTCATCAGCTGAGCAAGATTTAGATAAGTTTCTTCTGGGAGATATGGGAGACATTGATGATGACCCAGATTATGGTAATGGAGACTTTGATGATGATTTGGATAAACTGGTGGATAGTTCGGATGATGAGGAAGGGAAATCATAG 861 0.453 MDFWIKARSLAEEAAKRSKEIVSEASMRADQIRTAALKRADQFKHLAQGIHPPGGGVDPPPAESYEVSCYQEKELERFGITEELREFVKGITPSTFRDFPLEDDTQLSDVPTVSNVRKDLTEWQEKHAHLVLSTVKEISKLRYELCPRAMKERKFWRIYFILMNRHISPYEKRYMEDANLESSEQEDKKAFDSPEKEVKGGEAIKPPEAQVKVEKAIEPPEGGLTSIQGELEVKKESRTSSAEQDLDKFLLGDMGDIDDDPDYGNGDFDDDLDKLVDSSDDEEGKS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1984 286 MobiDBLite consensus disorder prediction 268 286 - -
Lele21g1984 286 ProSiteProfiles BSD domain profile. 115 167 IPR005607 -
Lele21g1984 286 MobiDBLite consensus disorder prediction 231 255 - -
Lele21g1984 286 MobiDBLite consensus disorder prediction 178 286 - -
Lele21g1984 286 SUPERFAMILY BSD domain-like 79 173 IPR035925 -
Lele21g1984 286 SMART wurzfinal6 115 167 IPR005607 -
Lele21g1984 286 PANTHER BSD DOMAIN-CONTAINING PROTEIN 27 275 - -
Lele21g1984 286 MobiDBLite consensus disorder prediction 178 215 - -
Lele21g1984 286 Pfam BSD domain 121 167 IPR005607 -
Lele21g1984 286 Gene3D BSD domain 91 179 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1984 Lele-ChrLele21 26795493 26798610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1984 5 261 EF-hand Containing Proteins AT1G69030 44.444 3.41e-61 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1984 21 26795493 26798610 Lele21g1984 21 26795493 26798610 ECH
Lele21g1984 21 26795493 26798610 Lele23g0029 23 176680 179746 hybridization
Lele21g1984 21 26795493 26798610 Lele24g1896 24 23704530 23707574 hybridization