Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0029 ATGGACTTGTGGAACAAAGCTAGAAGCTTAGCCGAGGAAGCCGCCAAGCGATCCCAGGACCTCTCCTTCGGCACTTCCAGATTCTCGGATATATTCGCCGAGACCACCAAGCTCTCCAAGGAAATTGTCTCTGAAGCCTTGAAGCGAGCCGACCAGTTCAAACACTTGGCCCAGGGGATTCATCCTCCCGGCGGCGGGGTTGACCCTCCGCTGGCGGAATCCTATGAAGTAAGTTGCGATCAAGAGAAGGAGCTGGAGAGGTTCGGCATCACCGAAGAATTGAGAGAGTTCGTGAGAGGGATCACTCCAAGCACGTTTCGAGATTTTCCTCTCGAAGATGACAAGCAGCTTTCTGATGTTCCTACGGTTTCTAATGTTAGGAAGGATCTTACTGAGTGGCAGGAAAAACATGCCAATCTTGTTCTATCTACTGTCAAGGAGATTTCAAAATTAAGGTATGAACTGTGTCCACGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATTCTTATGAACGGCCATATTTCCCCCTATGAGAAGAGGTACATGGAGGATGCTAAGCTAGAATCATCTGAACAAGCAGAAGATAAGAAACCAATTGAATCTCCAGAAAAAGAAGTAAACGATAGGGAAGCAATCAAACCCCCGGAAGCACAAGTAAAAGTTGAGAAAGCAATTGAACCCCAAGAAGCTGGACTGACTTCCATTCAGGGAGAGCTCGAGGTTAAAAAGGAGAGTAGAACTTCATCAGCTGAGCAAGATTTAGATGAGTTTCTTCTGGGAGATATGGGAGACATTGATGATGAACCAGATGATGGTAATGGAGACTTTGATGATGATTTGGATAAACTGGTGGATAGTTCGGATGATGAGAAAGGGGAATCATAG 894 0.4541 MDLWNKARSLAEEAAKRSQDLSFGTSRFSDIFAETTKLSKEIVSEALKRADQFKHLAQGIHPPGGGVDPPLAESYEVSCDQEKELERFGITEELREFVRGITPSTFRDFPLEDDKQLSDVPTVSNVRKDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILMNGHISPYEKRYMEDAKLESSEQAEDKKPIESPEKEVNDREAIKPPEAQVKVEKAIEPQEAGLTSIQGELEVKKESRTSSAEQDLDEFLLGDMGDIDDEPDDGNGDFDDDLDKLVDSSDDEKGES 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0029 297 MobiDBLite consensus disorder prediction 189 226 - -
Lele23g0029 297 PANTHER BSD DOMAIN-CONTAINING PROTEIN 12 285 - -
Lele23g0029 297 MobiDBLite consensus disorder prediction 260 287 - -
Lele23g0029 297 SUPERFAMILY BSD domain-like 89 183 IPR035925 -
Lele23g0029 297 MobiDBLite consensus disorder prediction 189 297 - -
Lele23g0029 297 ProSiteProfiles BSD domain profile. 125 177 IPR005607 -
Lele23g0029 297 Gene3D BSD domain 92 186 IPR035925 -
Lele23g0029 297 SMART wurzfinal6 125 177 IPR005607 -
Lele23g0029 297 Pfam BSD domain 131 176 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0029 Lele-ChrLele23 176680 179746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0029 2 272 EF-hand Containing Proteins AT1G69030 41.083 4.61e-62 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0029 23 176680 179746 Lele23g0029 23 176680 179746 ECH
Lele21g1984 21 26795493 26798610 Lele23g0029 23 176680 179746 hybridization
Lele22g1947 22 24144513 24147534 Lele23g0029 23 176680 179746 hybridization