Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1896 ATGGACTTCTGGAACAAAGCTCGAAGCTTAGCTGAGGAAGCCGCCAAGCGATCCCAGGACCTCTCCTTCGGCACTTCCAGATTCTCCGATATTGTAACCGAGACCACCAAGCGCTCCAAGGAAATTGTCTCTGAAGCTTCCAAGCGAGCCGATCAAATTCGAATTGATGCCTTGAAGCGAGCCGACCACTTCAAACACTTAGCCCAGGGGATTCATCCTCCCGGAGGCGGTGTTGCCCCGCCGCCGCCTGAATCCTATGAAGAGAAGGACCTGGAGAGGTTCGGTATCACCGAAGAATTGAGAGAGTTCGTGAAAGGGATCACTCCAAGCACGTTTCGAGATTTCCCTCTCGAAGATGACACGCAGCTTTCTGATGTTCCTACGGTTTCTAATGTTAGGAAGGATCTTACTGAGTGGCAGGAAAAACATGCCAATCTTGTTCTATCTACTGTCAAGGAGATTTCAAAATTAAGGTATGAGCTGTGTCCACGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTATGAACAGCAATATTTCCCCCTATGAGAAGAGGTACGTGGAGGATGCTAAGCTAGAATCATCTGAACAAGCAGAAGACAAGAAAGAAATTGAACCACCAGAAAAAGAAGTAAAAGATGGGGAAGCAATCAAACACCCGGAAGCACAAGTAAAAATTGAGAGAGCAATTGAAAAACCAGAAGTTGGACTGACTTCCATTCAGGAAGAGCTGGAAGTTAACAAGGAGAGTAGAACTTCATCAGCTGAGCAAGATTTGGATGAGTTTCTTCTGGGAGATATGGGAGACATTGATGATGACCCAGATGATGGTAATGGGGACATTGATGATGATTTGGATAAACTGGTGGGTAGTTCGGATGATGAGAAAGGGAAAGCATAG 912 0.4539 MDFWNKARSLAEEAAKRSQDLSFGTSRFSDIVTETTKRSKEIVSEASKRADQIRIDALKRADHFKHLAQGIHPPGGGVAPPPPESYEEKDLERFGITEELREFVKGITPSTFRDFPLEDDTQLSDVPTVSNVRKDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILMNSNISPYEKRYVEDAKLESSEQAEDKKEIEPPEKEVKDGEAIKHPEAQVKIERAIEKPEVGLTSIQEELEVNKESRTSSAEQDLDEFLLGDMGDIDDDPDDGNGDIDDDLDKLVGSSDDEKGKA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1896 303 MobiDBLite consensus disorder prediction 287 303 - -
Lele24g1896 303 PANTHER BSD DOMAIN-CONTAINING PROTEIN 4 296 - -
Lele24g1896 303 SMART wurzfinal6 131 183 IPR005607 -
Lele24g1896 303 SUPERFAMILY BSD domain-like 95 189 IPR035925 -
Lele24g1896 303 MobiDBLite consensus disorder prediction 197 234 - -
Lele24g1896 303 Pfam BSD domain 137 178 IPR005607 -
Lele24g1896 303 Gene3D BSD domain 107 194 IPR035925 -
Lele24g1896 303 ProSiteProfiles BSD domain profile. 131 183 IPR005607 -
Lele24g1896 303 MobiDBLite consensus disorder prediction 250 303 - -
Lele24g1896 303 MobiDBLite consensus disorder prediction 266 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1896 Lele-ChrLele24 23704530 23707574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1896 2 278 EF-hand Containing Proteins AT1G69030 42.949 3.43e-67 211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1896 24 23704530 23707574 Lele24g1896 24 23704530 23707574 ECH
Lele21g1984 21 26795493 26798610 Lele24g1896 24 23704530 23707574 hybridization
Lele22g1947 22 24144513 24147534 Lele24g1896 24 23704530 23707574 hybridization