Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1979 ATGCATTTTGAAAAGCCCTGCAAAGTTTTGACTTTTGACCATCTTAAAGAAGAAGGCTCAAGCTACATGGGCTGGGCTATTGCTCTTCATGGCGGCGCTGGCGACATTCCTCTCTCCTTGCCACCGGAACGCCGTCTGCCGCGCGAGGAAGCCCTCCGGCACTGCCTTCAGATCGGCGTCGAAGCTCTCAAATCCAAAATGGCCCCCCTAGACGTGGTCGAGCATGTGGTTCGGGAATTAGAGAACTGTCCGCATTTTAATGCGGGAAGGGGATCTGTGCTGACAAACAAAGGCACGGTTGAGATGGAAGCTTCTATCATGGAAGGCAATACTATGAAATGTGGAGCTGTTTCTGGGCTCACTACGGTTGTCAATGCAATATCTTTAGCTCGATTGGTCATGGAGAAGACACCTCATATATATCTAGCATTTGATGGAGCAGAGGAATTTGCTAAAGAACAAGGTGTTGAGACTGTCGATTCAAGCCACTTTATTACTGCGGAAAACATTGAAAGACTAAAGCAGGCACGGGAAGCAAATAGGGTTCAGATCGATTACACTCAACCCATCCAAAAACCTGATGCAAAGAAGGAAACGCTAATTGCTAATGGTGAGAGCCAACTAGGAACAGTTGGGTGTGTGGCTGTTGACAGTCATGGGAATCTGGCTTCTGCAACATCCACTGGTGGACTGGTGAACAAAATGGTTGGTAGAATTGGCGACACGCCAGTCATCGGAGCTGGAACATATGCAAATGAGCTCTGTGCAGTTTCTGCTACAGGTAAAGGAGAATCAATAATACGTGGAACTGTTGCAAGAGATGTGGCAGCCCTGATGGAGTTCAAAGGCCTATCTCTTGAAGAAGCTGCTAAGTGTGCTGTTGAGGAACGGACCCCAAAAGGCACTGTTGGCTTGGTTGCTGTGTCTGCAAAAGGAGAAATTGCTGTGTCTTATAACACAACGGGCATGTTCCGGGCATGTGCTTCTGAGGATGGCTATTCGGAGATTGCAATTTGGTCTTCTGGCCCAAATTGA 1035 0.4792 MHFEKPCKVLTFDHLKEEGSSYMGWAIALHGGAGDIPLSLPPERRLPREEALRHCLQIGVEALKSKMAPLDVVEHVVRELENCPHFNAGRGSVLTNKGTVEMEASIMEGNTMKCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEEFAKEQGVETVDSSHFITAENIERLKQAREANRVQIDYTQPIQKPDAKKETLIANGESQLGTVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPVIGAGTYANELCAVSATGKGESIIRGTVARDVAALMEFKGLSLEEAAKCAVEERTPKGTVGLVAVSAKGEIAVSYNTTGMFRACASEDGYSEIAIWSSGPN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1979 344 FunFam Isoaspartyl peptidase/L-asparaginase 210 341 - -
Lele21g1979 344 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 25 339 IPR029055 -
Lele21g1979 344 Pfam Asparaginase 25 339 IPR000246 GO:0016787
Lele21g1979 344 Gene3D (Glycosyl)asparaginase 210 342 - -
Lele21g1979 344 PANTHER L-ASPARAGINASE 25 326 IPR000246 GO:0016787
Lele21g1979 344 CDD Asparaginase_2 26 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1979 Lele-ChrLele21 26759102 26761612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1979 27 316 Miscellaneous Gene Families AT4G00590 23.171 1.39e-14 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1979 21 26759102 26761612 Lele21g1979 21 26759102 26761612 ECH
Lele21g1979 21 26759102 26761612 Lele23g0035 23 209217 211277 hybridization
Lele21g1979 21 26759102 26761612 Lele24g1890 24 23673864 23675611 hybridization