Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0035 ATGGGCTGGGCTATTGCTCTTCATGGCGGCGCCGGCGACATTCCTCTCTCCTTGCCACCGGAACGCCGTCTGCCGCGTGAGGAAGCCCTCCGGCACTGCCTTCAGATCGGCGTCGAAGCTCTCAACTCCGAAATGACCCCCTTAGATGTGGTCGAGCTTGTGGTTCGTGAATTAGAGAACTGTCCGCATTTTAATGCGGGAAGGGGATCTGTGCTGACAAACAAAGGCACGGTTGAGATGGAAGCTTCTATCATGGAAGGCAATACCATGAAATGTGGAGCTGTTTCTGGGCTCACTACGGTTGTCAATGCAATATCTTTAGCTCGATTGGTCATGGAGAAGACACCTCATATATATCTAGCATTTGATGGAGCAGAGGAATTTGCTAAAGAACAAGGTGTTGAGACTGTGGATTCAAGCCACTTTATTACTGCGGAGAACATTGAAAGACTAAAGCAGGCACGGGAAGCAAATAGGGTTCAGATTGATTACACTCAACCCATCCAAAAAACTGATGCAAAGAAGGATACGCCAATTGCTAATGGTGAGAGCCAACTAGGAACAGTTGGGTGTGTGGCTGTTGACAGTCATGGGAATCTGGCTTCTGCAACATCCACTGGTGGACTGGTGAACAAAATGGTTGGTAGAATTGGCGACACGCCAGTCATCGGAGCTGGAACATATGCAAATGAGCTCTGTGCAGTTTCTGCCACAGGTAAAGGAGAATCAATAATACGTGGAACTGTTGCAAGAGATGTGGCAGCCCTGATGGAGTTCAAAGGCCTATCTCTTGAAGAAGCTGCTAAGTGTGTTGTTGAGGAACGGACCCCAAAAGGCACTGTTGGCTTGGTTGCTGTGTCTGCAAAAGGAGAAATTGCTGTGTGTTATAACACAACGGGCATGTTCCGGGCATGTGCTTCTGAGGATGGCTATTCGGAGATTGCAATTTGGTCTTCTGGCCCAAATTGA 969 0.485 MGWAIALHGGAGDIPLSLPPERRLPREEALRHCLQIGVEALNSEMTPLDVVELVVRELENCPHFNAGRGSVLTNKGTVEMEASIMEGNTMKCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEEFAKEQGVETVDSSHFITAENIERLKQAREANRVQIDYTQPIQKTDAKKDTPIANGESQLGTVGCVAVDSHGNLASATSTGGLVNKMVGRIGDTPVIGAGTYANELCAVSATGKGESIIRGTVARDVAALMEFKGLSLEEAAKCVVEERTPKGTVGLVAVSAKGEIAVCYNTTGMFRACASEDGYSEIAIWSSGPN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0035 322 FunFam Isoaspartyl peptidase/L-asparaginase 188 319 - -
Lele23g0035 322 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 317 IPR029055 -
Lele23g0035 322 CDD Asparaginase_2 4 310 - -
Lele23g0035 322 PANTHER L-ASPARAGINASE 3 304 IPR000246 GO:0016787
Lele23g0035 322 Pfam Asparaginase 3 317 IPR000246 GO:0016787
Lele23g0035 322 Gene3D (Glycosyl)asparaginase 188 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0035 Lele-ChrLele23 209217 211277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0035 5 252 Miscellaneous Gene Families AT4G00590 24.542 3.04e-14 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0035 23 209217 211277 Lele23g0035 23 209217 211277 ECH
Lele21g1979 21 26759102 26761612 Lele23g0035 23 209217 211277 hybridization
Lele22g1942 22 24111629 24113595 Lele23g0035 23 209217 211277 hybridization