Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1890 ATGGAGAAGACACCTCATATGTATCTAGCATTTGATGGAGCAGAGGAATTTGCTAAACAACAAGTGAGAGTACAGTTTTATCACACGATTTCTTTTGGAGTCTTTGTATGGCGTAGAGATGTCGATTCAAGCCACTTCATCACTGCGGAAAACATTGAAAGACTAAAGCAGGCACGGGAAGCAAATAGGGTTCAGATCGATTACACTCAACCCATCCAAAAAACTGATGCTAAGAAGGAAACACCAATTCCTAATGGTGATAGCCAACTAGGAACAGTTGGGTGTGTGGCTGTTGACAGTCATGGGAATCTAGCTTCTGCAACATCCACTGGTGGACTGGGGAACAAAATGGTTGGTAGAATTGGGGACACGCCACTCATCGGAGCTGGGACATATGCAAATGAGCTGTGTGCAGTTTCTGCGACTGAAGTTGATAAATGTGTTGTCGAGGAACGGACCCCAAAAGGAAATGTTGGCTGGGTTGCTGTGTCTGCAAAAGGAGAAATTGCTGTCGCATACAACACTACGGGCATGTGCTTCTGA 543 0.4512 MEKTPHMYLAFDGAEEFAKQQVRVQFYHTISFGVFVWRRDVDSSHFITAENIERLKQAREANRVQIDYTQPIQKTDAKKETPIPNGDSQLGTVGCVAVDSHGNLASATSTGGLGNKMVGRIGDTPLIGAGTYANELCAVSATEVDKCVVEERTPKGNVGWVAVSAKGEIAVAYNTTGMCF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1890 180 PANTHER L-ASPARAGINASE 1 142 IPR000246 GO:0016787
Lele24g1890 180 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 179 IPR029055 -
Lele24g1890 180 Gene3D (Glycosyl)asparaginase 92 150 - -
Lele24g1890 180 Pfam Asparaginase 1 142 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1890 Lele-ChrLele24 23673864 23675611 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1890 24 23673864 23675611 Lele24g1890 24 23673864 23675611 ECH
Lele21g1979 21 26759102 26761612 Lele24g1890 24 23673864 23675611 hybridization
Lele22g1942 22 24111629 24113595 Lele24g1890 24 23673864 23675611 hybridization