Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1959 ATGGCAATTGTAGTGACTCAAGGTTACTTGATTCATATTGGGATGTTGGTTGCTTATTGGTTCACCATGTTACCTGAATGGATCTCCTGGGTGCTTCTGGTTGCCATGGCATTGTATGATCTTGCGGCTGTTTTATTACCAGTTGGACCATTAAGACTTTTGGTAGAACTTGCAATCTCAAGAGATGAAGGAATTCCTGCACTGGTTTATGAGGCTAGGCCAGTGAACCATGACAAGGTGGATCCAAGGGGTGATGTAACTCAGAGGAGGCTGTGGAGAGATAGGAGGGTTGAGAATTCAATTCCACCAACTGATACCAACCCAAGTGTCAATTCTGTTCACAGAGGAGAAGATGGAGTGTCAAGTGAAAGCTTGATGGCAGAGGGGATTGGGTTAGGGTCATCTGGAGCAATAAAGCTAGGGCTAGGAGATTTCATTTTCTACAGTGTTTTGGTTGGAAGGGCAGCGATGTATGATTATATGGCAGTGTATGCGTGTTATCTTGCTATCATTGCTGGGCTGGGCATCACTTTGATGCTATTAGCGTTGTATCAGAAAGCCTTATCGGCTCTTCCAGTGTCAATCATGCTGGGAGTATCCTTTTATTGCTTGACCAGGTTCTTGCTTGAACCATTTGTTCTGCAGTGTTCGTTGAACCTCTTCATGCGATCCCTTCCAAGTGCCACCAAACTGAACAATATGGAATCTTCTGGTATTGCTGAAAAAGTTGAGGAAAAGAATGATCATGGAAATAAATTGAACAGACGTGATGTGAGAATAAATCCTCGTAACACAACTGGTGTGGAACAAGAACAAGAATGCATGGCGAGTAGCAGTTCGACGACGGATCCTGTTGCGGATATTGGTAAAGCTGGTGGCGCAAACTAA 888 0.4414 MAIVVTQGYLIHIGMLVAYWFTMLPEWISWVLLVAMALYDLAAVLLPVGPLRLLVELAISRDEGIPALVYEARPVNHDKVDPRGDVTQRRLWRDRRVENSIPPTDTNPSVNSVHRGEDGVSSESLMAEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDYMAVYACYLAIIAGLGITLMLLALYQKALSALPVSIMLGVSFYCLTRFLLEPFVLQCSLNLFMRSLPSATKLNNMESSGIAEKVEEKNDHGNKLNRRDVRINPRNTTGVEQEQECMASSSSTTDPVADIGKAGGAN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1959 295 PANTHER PRESENILIN 123 222 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele21g1959 295 SMART psh_8 1 209 IPR006639 GO:0004190|GO:0016020
Lele21g1959 295 PRINTS Presenilin family signature 40 57 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele21g1959 295 PRINTS Presenilin family signature 23 30 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele21g1959 295 MobiDBLite consensus disorder prediction 242 259 - -
Lele21g1959 295 Pfam Presenilin 122 213 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele21g1959 295 Pfam Presenilin 2 112 IPR001108 GO:0004190|GO:0016020|GO:0016485
Lele21g1959 295 MobiDBLite consensus disorder prediction 242 295 - -
Lele21g1959 295 MobiDBLite consensus disorder prediction 260 285 - -
Lele21g1959 295 FunFam Presenilin 113 214 - -
Lele21g1959 295 Gene3D Presenilin 123 215 IPR042524 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1959 Lele-ChrLele21 26632129 26635268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1959 1 222 Miscellaneous Gene Families AT2G29900 62.948 6.97e-96 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1959 21 26632129 26635268 Lele21g1959 21 26632129 26635268 ECH
Lele21g1959 21 26632129 26635268 Lele23g0055 23 355030 356373 hybridization
Lele21g1959 21 26632129 26635268 Lele24g1872 24 23521376 23522719 hybridization