Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1815 ATGGCGCTGCGCGTGCTTCTTGTGTTGGGTGTAATGCTGCTGATGCTGTCCCTTCCACAGGTTTCATCTGATGTGGAGATTGAAGAAGAAGAAGAAGAAGTGGAGCATGCGCTGCCAATAGTGAAGGAGGGGAACAGGAAGCTGATGCAGAACATAGACTGTGGAGGGCTGTGTGAGGGAAGGTGCAGCAAGCATTCAAGGCCGAACCTGTGCAAGAGAGCTTGTGGAACTTGCTGTGTGAGGTGCAAGTGCGTGCCGCCAGGGACGTCGGGAAACAGGGAGCTTTGTGGAACTTGCTACACTGATATGACCACACACGGCAACAAGACCAAGTGTCCTTAG 342 0.5292 MALRVLLVLGVMLLMLSLPQVSSDVEIEEEEEEVEHALPIVKEGNRKLMQNIDCGGLCEGRCSKHSRPNLCKRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1815 113 Pfam Gibberellin regulated protein 53 113 IPR003854 -
Lele21g1815 113 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1815 Lele-ChrLele21 25767630 25768056 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1815 21 25767630 25768056 Lele17g1018 17 20886875 20889306 CCT
Lele21g1815 21 25767630 25768056 Lele18g0521 18 3070497 3072971 CCT
Lele21g1815 21 25767630 25768056 Lele19g0539 19 3120438 3122874 CCT
Lele21g1815 21 25767630 25768056 Lele20g0912 20 15457143 15459652 CCT
Lele21g1815 21 25767630 25768056 Lele23g0192 23 1252066 1253001 hybridization
Lele21g1815 21 25767630 25768056 Lele24g1752 24 22729602 22731292 hybridization