Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1495 ATGCTGAGCTCTGATGATGTGTTCTTCGACTCAGCAGACTATCTGTCCCCTCAAGAATCTGATTTATTAGGTTCCAACGAGTTTGGTTATGGGATTTGGGTGAATGAACCTCGCAGTGTGAAGGAAAGAAGACAACGTTTTCTTGTGGGAATGGGTTTATCTGATATGTCTTCAAATGTAGCTATCTCAAATGTAGTTGAGAAAGAAGAAACTTCTGAAGCAAAAATCCCCTTTGATGAAGATGAAGAAGAGGTTGTAAGCTTTCTTGAAAGCAGACACAAAGAAGCTGAGGTCCAAGAACGACATGGGGATTCAGATACGGAAAAAGAGAAGAAGAGGATGAAGAAGAAGAAAAACTGGTGGGAGAGATTTGTGAACAAGAGGAAAGAAAGTGGAGGAGAAAAAATCAGATCAAAACTCAACAAAGGGGCAAATAATAATAAAACTCATAGGATAAAGGTGCAGAAGAACAAGAAGACGTGGAAGGAGTTAAGTGGATTATATGTTGGACAAGAGATTTCAAAAGCTCACGATGGAATTATAAGGACTATGAAATTCAGTCCCAATGGAAAATATCTTGGAACAGGAGGTGAAGATGGAGTCGTAAGAATATGGTGTGTGGTGTTACAGGATATATCTAGTGAATATTTCAATGCAGAAGACAGTCTTGTTACAAAAGTGAAACAAGGCATGTTCTGTTCTTGGAAGAAGAACAGGTCAAGTCAAAGAAACTACCTTGTACTTCCAAACAAGGTTTTTCAAATTGAGGAATCAGTACAGCAAGAATTCTTTGGTCACTCCAGTGATGTCTTGGACTTGGCATGGTCTAATTCAGAAGTGAGTTACTGTTTTTTTATTCTCCTTTCATCTTCCATGGATAAAACCGTCCGTTTGTGGCAAATTGGATGTGATCATTGCTTAAGTGTTTTTTGTCATAATGATTATGCAGTGACATGCATTCAAGTGAATCCAGTTGATGAAAATTACTTCATAAGTGGGTCCATTGATGGAAAAGTCAGAATATGGGGATTACATGAAGAGAGGGTTGTTGACTGGGCAGATATACATGATGTCATAACTGCTATAAGTTACAAGCCAGATGGGAAAGGATTTGTAGTTGGCTCAATTTCAGGAACTTGCCGGTTTTATGCTACTTCAGGCAAATATTGTAGACTTGAGGCACAGATTCATGTTGATGGGAAGAAGAGATCAAGGGGAAACAAAATTAGTGGCATTCAGTTTTCTCATGAGAATCCACATAGAGTTTTGATTACATCAGAAGATTCTAAATTTTGCTTATTGGAAGGGATTGATGCTGTCCAAAAATACAAAGGTCTTTCAAAGTCAGGAGGTCAAATGATAGGTTCTTTCACATCAAGTGGAAAACTCATAATTTCAGTTGGAGAGGATTCTCATGTGTATATTCGGAACTCAAGTGACTTAAAACACAAGAAATCCACAGCATTTTGTGAATACTTTTTCTCTGAAGGTGTTGTTGTAGCAGTACCTTGGTCAGGAATGAACACAAACCAAATATCAGACTTACAACCCCAAATGGTTAAAGATAGAGGAGAATGTTTCTGTCACAGTAATTGGTTCTCCATTGATCACCTGTATCGAGGTTCTGTGACGTGGCCCGAGGAGAAGCTTCCTCAAGTGTGGAATTCAGCTTCTGCAGAAGAAGAAGATGCTTATAGACATCAACGGAAGAAGAAGCTATGTCCAAAGGATACCTGGGGTTTGTCAATTGTGACAGCAAGTTGTGATGGAACTATAAAGATATTTCACAACATTGGAGTGCCTTTAGAAATATAA 1815 0.3851 MLSSDDVFFDSADYLSPQESDLLGSNEFGYGIWVNEPRSVKERRQRFLVGMGLSDMSSNVAISNVVEKEETSEAKIPFDEDEEEVVSFLESRHKEAEVQERHGDSDTEKEKKRMKKKKNWWERFVNKRKESGGEKIRSKLNKGANNNKTHRIKVQKNKKTWKELSGLYVGQEISKAHDGIIRTMKFSPNGKYLGTGGEDGVVRIWCVVLQDISSEYFNAEDSLVTKVKQGMFCSWKKNRSSQRNYLVLPNKVFQIEESVQQEFFGHSSDVLDLAWSNSEVSYCFFILLSSSMDKTVRLWQIGCDHCLSVFCHNDYAVTCIQVNPVDENYFISGSIDGKVRIWGLHEERVVDWADIHDVITAISYKPDGKGFVVGSISGTCRFYATSGKYCRLEAQIHVDGKKRSRGNKISGIQFSHENPHRVLITSEDSKFCLLEGIDAVQKYKGLSKSGGQMIGSFTSSGKLIISVGEDSHVYIRNSSDLKHKKSTAFCEYFFSEGVVVAVPWSGMNTNQISDLQPQMVKDRGECFCHSNWFSIDHLYRGSVTWPEEKLPQVWNSASAEEEDAYRHQRKKKLCPKDTWGLSIVTASCDGTIKIFHNIGVPLEI 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1495 604 Pfam WD domain, G-beta repeat 260 299 IPR001680 GO:0005515
Lele21g1495 604 Pfam WD domain, G-beta repeat 306 342 IPR001680 GO:0005515
Lele21g1495 604 Pfam WD domain, G-beta repeat 175 205 IPR001680 GO:0005515
Lele21g1495 604 SUPERFAMILY WD40 repeat-like 174 594 IPR036322 GO:0005515
Lele21g1495 604 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 174 205 - -
Lele21g1495 604 Gene3D - 168 512 IPR015943 GO:0005515
Lele21g1495 604 MobiDBLite consensus disorder prediction 92 115 - -
Lele21g1495 604 ProSiteProfiles Trp-Asp (WD) repeats profile. 310 352 IPR001680 GO:0005515
Lele21g1495 604 ProSiteProfiles Trp-Asp (WD) repeats profile. 174 205 IPR001680 GO:0005515
Lele21g1495 604 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 301 IPR001680 GO:0005515
Lele21g1495 604 PANTHER WD REPEAT DOMAIN 44 84 601 IPR040324 -
Lele21g1495 604 SMART WD40_4 166 206 IPR001680 GO:0005515
Lele21g1495 604 SMART WD40_4 303 343 IPR001680 GO:0005515
Lele21g1495 604 SMART WD40_4 256 300 IPR001680 GO:0005515
Lele21g1495 604 SMART WD40_4 399 435 IPR001680 GO:0005515
Lele21g1495 604 SMART WD40_4 345 384 IPR001680 GO:0005515
Lele21g1495 604 PRINTS G protein beta WD-40 repeat signature 193 207 IPR020472 -
Lele21g1495 604 PRINTS G protein beta WD-40 repeat signature 330 344 IPR020472 -
Lele21g1495 604 PRINTS G protein beta WD-40 repeat signature 287 301 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1495 Lele-ChrLele21 23259914 23262979 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1495 21 23259914 23262979 Lele23g0518 23 3795093 3798129 hybridization
Lele21g1495 21 23259914 23262979 Lele24g1436 24 20318445 20321597 hybridization