Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1351 ATGAGAGAGGCCCATGGAAAGCAAGTTTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCCGAAGAAGAATTCGTACAGAGTGCAGAAGTCATCTCCCAACATCTCCATGCTCATGGATATGAGAAGAAAAGTTGAGGGTGCTTGTTCTTATTCTCTTGGATTTGATGTGATTGATGAATGGGGAAGGATGATCCCTGATCCACAAAGGTGGCCTTCTTCTAAAGATGGGAAAGGATTCAAAGAAGTGGCAGATAAAGTACATAGCATGGGTTTGAAGGTGTTCCATATACTGGATCCGATTCTCATGGCTCTTGATCGCCTCATTGTACACTCTCTGCCCCCTGGAACCAGTGTGACACCAGCAATGGCCAAGGATGTCAGTGGACTAGTTAACTTATATCGCATAACAGGAGATGACTGGGATACATGGGGTGATGTTGTGGCTCATTTTGATGTGTCAAGGTGTAAACATTGTTTTGAGGTTCAAATGAAGGTCCACACAGATGACTTTGTGGACTATGGCAAAGTCTCCTCTCATTTTCCATATATCACAAGCATGATGAATATGAAGATTCAAGGACAAGATCTTACTGAGCAAATGAGAGGATCTAAGAGAAGTAGGCAAACATCAAATACACATTTAATTGGTCTCACTGGCTGTGCTGAGTCAAAGGCAGTTGGTTGGTCAATGGAAAGCTTTAAAGAAGATGTTGAAAGAATCTGTTGGATACCTTGCTCAGAAAACAAGCATCAGGCACCTTTCTGTGTGCACAAGAGAGAAATTCGTGTGGCATTAGAAAAGAGCACGAATCAAAAAGATCATAGAAGAAAACATCATTTAGTTGCAGCCAACACAAAGCAACTTTGTCTTGAAGCTTCTCCAAAAAGAAAGCTTACTTCTAGAGAATTTAAGAGAGGCTCATTTTCTCCTTGCAGATGGGATGCTAATCAGATGTGGCAATTGAACCCTAATGGGACCCTGGTAAATAGTTATTCCAGCCTCTGTGCTACAGGAGATTCTGCTAAAGGAGAAGTCTATGTTGCTTTCTTCAACCTGAATGAACAGAAGACAGTGATACCTGCAAAGACATCAGACCTTGCCAAGTTAATACCTGGCAACTATAGTGCAGGGAAGTGTGGAGTGGACAGGGCATCAACACAAGACATGGGACGCTGTCAGGCTGTCAGCTGA 1209 0.4268 MREAHGKQVSHQEVGIPMIPFAGQFPKKNSYRVQKSSPNISMLMDMRRKVEGACSYSLGFDVIDEWGRMIPDPQRWPSSKDGKGFKEVADKVHSMGLKVFHILDPILMALDRLIVHSLPPGTSVTPAMAKDVSGLVNLYRITGDDWDTWGDVVAHFDVSRCKHCFEVQMKVHTDDFVDYGKVSSHFPYITSMMNMKIQGQDLTEQMRGSKRSRQTSNTHLIGLTGCAESKAVGWSMESFKEDVERICWIPCSENKHQAPFCVHKREIRVALEKSTNQKDHRRKHHLVAANTKQLCLEASPKRKLTSREFKRGSFSPCRWDANQMWQLNPNGTLVNSYSSLCATGDSAKGEVYVAFFNLNEQKTVIPAKTSDLAKLIPGNYSAGKCGVDRASTQDMGRCQAVS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1351 402 Gene3D Aldolase class I 43 99 IPR013785 -
Lele21g1351 402 Gene3D Aldolase class I 100 219 IPR013785 -
Lele21g1351 402 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 106 168 IPR002241 GO:0004553|GO:0005975
Lele21g1351 402 SUPERFAMILY Ricin B-like lectins 291 346 IPR035992 -
Lele21g1351 402 SUPERFAMILY (Trans)glycosidases 63 204 IPR017853 -
Lele21g1351 402 CDD RICIN 276 349 IPR000772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1351 Lele-ChrLele21 21979506 21984004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1351 106 160 Glycoside Hydrolase AT3G26380 70.909 3.61e-20 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1351 21 21979506 21984004 Lele21g1351 21 21979506 21984004 ECH
Lele21g1351 21 21979506 21984004 Lele23g0672 23 5188681 5191736 hybridization
Lele21g1351 21 21979506 21984004 Lele24g1306 24 19059447 19065058 hybridization