Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0672 ATGAAGTGTGTCTCCGTGATCTCAATCTGTTTCCTTCTTTTTCTTTTGGGTATTCAGAGAGAGGCCTATGGAAAGCAAGTGTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCCGAAGAAGAATTCTTACAGAGTGCAGAAGTCATCTCCGAGCGTCTCCATGCTCATGGATATGAGGAAAGTTGAGGGTGCTTATACTGATTCTCTTGGATTTGATGTGATTGATGAATGGGGATGGATGATCCCTGATCCACAAAGGTGGCCTTCTTCTAAAGATGGGAAAGGGTTCAAAGAAGTGGCAGATAAATGTGTTCCATATACTGAATCCGGTAAAGTGTGGCATGCAAAAGACATAGCAATCCCAGAAATGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGCTTGGGGCAGGAAGAGCCTTTTTGAGGTCCCTCTATGAGCAGTATGCTGCGTGGGGTGTTGATTATGTGAAACACGACTGTGTGTTCGGCGACGACTTAGATTTGAATGAAATAAGATATGTTTCAGAGATTCTCAGGGCTCTTGATCGCCCCATTGTATACTCTCTGGCCCCTGGAACCAGTGTGACATCAGCAATGGCCAAAGATGTCTGTGGACTAGTTAACTTATATCACATAACAGGAGATGACTGGGATACATGGGGTGATGTTGTGGCTCATTTTGATGTGTCAAGGTGTAAACATTGTTTTGAGGGATATTCATGGCCTGATTTGGATATGCTACCATTGGGATGGTTAACTGATCCAGGTGACTTAGATATGCTATCTTGCTTCTACGTTTTCTTATCCAGATTGAATATCATGACGTTCTTGCTGTATTGGGTTGGTGATAATGGATGA 891 0.431 MKCVSVISICFLLFLLGIQREAYGKQVSHQEVGIPMIPFAGQFPKKNSYRVQKSSPSVSMLMDMRKVEGAYTDSLGFDVIDEWGWMIPDPQRWPSSKDGKGFKEVADKCVPYTESGKVWHAKDIAIPEMACAWMPHGFMSVNTKLGAGRAFLRSLYEQYAAWGVDYVKHDCVFGDDLDLNEIRYVSEILRALDRPIVYSLAPGTSVTSAMAKDVCGLVNLYHITGDDWDTWGDVVAHFDVSRCKHCFEGYSWPDLDMLPLGWLTDPGDLDMLSCFYVFLSRLNIMTFLLYWVGDNG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0672 296 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 84 261 IPR002241 GO:0004553|GO:0005975
Lele23g0672 296 SUPERFAMILY (Trans)glycosidases 80 263 IPR017853 -
Lele23g0672 296 Gene3D Aldolase class I 60 273 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0672 Lele-ChrLele23 5188681 5191736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0672 65 267 Glycoside Hydrolase AT3G26380 59.671 2.19e-98 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0672 23 5188681 5191736 Lele23g0672 23 5188681 5191736 ECH
Lele21g1351 21 21979506 21984004 Lele23g0672 23 5188681 5191736 hybridization
Lele22g1347 22 19253424 19259089 Lele23g0672 23 5188681 5191736 hybridization