Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0045 ATGAGTATGACATTTTCTCTAGCACCAAACGCTCCCATCATTGGATCCAGCCATGTTCGTGTGAGCAAATCAATTAGCACAAGACTCGGTGTTATAAGAGCACAAGTGACCTTGGCTCCCAAACCAACAAGGGATGCCACTTATCCTCAGTTGTCAAAACAGGAAATTCCTCTCGCTGATCTGCACGTACAGGAAGTTGTAGAGAGGCAGACTCAGCCGGATAACTTCATCTCCACCACTCCTCATAAAAAGTCTCAGTTCCGTCCTGGTTTTTTAGCGGAAGCATACGAATGTTCCAGAAAGATCTGTAAAGAATATGCCAAGACCTTCTATCTAGGTTATTTGAACTATTCTATCTTCTTTCCTGCGCAACTTAGACCGTCTCCATTCTTGACCAGGAACTCTACTCATGACAGAAGAAAGACAGAAAGCCATATGGGCGATTTATGGGGGACAGATGAATTGGTTGATGGTCCAAATGCGGTCTATATGAGCTCTGCTGTTCTTGATAGGTGGGAAAAGAGACTCCATGACATTTTCAACGGACGCCCTTATGACATGCTTGATGCTGCTCTGACCGACACTGTTGCTATGTTTCCCTTGGACATTAAGGGACATGATAGAAGTGCATCGAGAGGTAGAGTTTACCTTCCCCAAGATGAACTTGCCCAGTTTGGCCTAAGCGACAAGGATGTTTTCTCAAGAACCGTCACTGAAGAATGGAAGGTGTTCATGAAACATCAGATAAGCAGGGCAAGATTATACTTCAGCTTGGCAGAGGAAGGAGCTTCTCAGCTTAAGAAGGCCAGCCGTTGGCCGGTTTGGTCGTCGTTAATAATATACGGTAAGATCTTGGATGCAATCGAAGACAACGGATATGACAACTTGACAAGAAAAGCCTACGTAGGAAGAGCTAAGAAGCTTATGCTGTTGCCTCTAGCTTTCACCAGATCTCTCTCATTCTCTCCCAAGGATCAGCACACACTCTCGCCCTTCAACAACCACCTTCAATAA 1014 0.4507 MSMTFSLAPNAPIIGSSHVRVSKSISTRLGVIRAQVTLAPKPTRDATYPQLSKQEIPLADLHVQEVVERQTQPDNFISTTPHKKSQFRPGFLAEAYECSRKICKEYAKTFYLGYLNYSIFFPAQLRPSPFLTRNSTHDRRKTESHMGDLWGTDELVDGPNAVYMSSAVLDRWEKRLHDIFNGRPYDMLDAALTDTVAMFPLDIKGHDRSASRGRVYLPQDELAQFGLSDKDVFSRTVTEEWKVFMKHQISRARLYFSLAEEGASQLKKASRWPVWSSLIIYGKILDAIEDNGYDNLTRKAYVGRAKKLMLLPLAFTRSLSFSPKDQHTLSPFNNHLQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0045 337 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 210 319 - -
Lele21g0045 337 Gene3D Farnesyl Diphosphate Synthase 208 313 IPR008949 -
Lele21g0045 337 Pfam Squalene/phytoene synthase 205 304 IPR002060 GO:0009058
Lele21g0045 337 SUPERFAMILY Terpenoid synthases 95 319 IPR008949 -
Lele21g0045 337 Gene3D Farnesyl Diphosphate Synthase 86 207 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0045 Lele-ChrLele21 324203 326232 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0045 21 324203 326232 Lele23g2011 23 22854881 22856910 hybridization
Lele21g0045 21 324203 326232 Lele24g0039 24 292079 294375 hybridization